Populus nigra (Lombardy poplar): 133681761
Help
Entry
133681761 CDS
T10372
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133681761
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
133681761
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
133681761
Prokaryotic type
133681761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
133681761
NCBI-ProteinID:
XP_061960874
LinkDB
All DBs
Position
2:37514073..37517485
Genome browser
AA seq
366 aa
AA seq
DB search
MQISIPLFSSAPNPKIPSLFPFQHLPSIFHGKGKPTTLTTRNFHFLPLKIKNKPFIVKAS
SFLSVIGRAIEEEEDYRKARAAVIRKGIDLGGYAIEGLSIGGQETCIIIPEFKCAFDIGR
CPTRAIHQNFVFITHAHLDHIGGLPMYVASRGLYSLKPPTIFVPPCIKDDVEKLFDIHRA
MGQVELNFDLVALDVGETYELRNDVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYIHLKGK
QIEKLKKSGVEITDIILSPEVAFTGDTTAEYMLDPRNADALRAKVLITEATFLDEDFTTE
HARQRGHTHLFEIIENAKWIRSKAILLTHFSSRYSIEDIREAVLKLQSRVSAKVVPLTEG
FKSMYS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctctatccctttattctcatcagctcccaatcctaaaatcccatcacttttc
ccttttcagcacctccccagtattttccatggaaaaggaaaacctacaacattaacaacc
cgtaattttcatttcctccctctcaaaattaaaaacaagcccttcatcgtcaaagcctcc
agctttttatcagtaatcgggcgtgctattgaggaagaagaagactacagaaaggcccgt
gcagctgttatccgtaaaggaattgacttgggagggtatgcaattgagggtctgtccatt
ggaggccaagagacttgtataattataccagagtttaagtgtgcttttgatattgggagg
tgccccaccagagctattcaccagaattttgtcttcatcactcatgcccatcttgatcac
attggtgggctgccaatgtatgtggctagtcgtggtttgtacagcttaaagcctccaaca
atatttgtccctccgtgtatcaaagacgatgttgagaaactatttgacattcacagggca
atggggcaagtagagcttaattttgatttggttgcattggatgtgggtgaaacatatgaa
ttgcggaatgatgttgtggtccgaccattcagaactcaacatgttatacccagtcagggt
tatgtcatctattcggtgaggaaaaaattgaagaaacaatacattcatctcaaaggaaaa
caaatagagaaattgaagaagtctggtgttgagattacagacataatattgtcccctgag
gtggcctttactggagataccacagcagagtacatgcttgatccgcgtaatgcagatgcg
ttgagggcaaaagttctaataactgaggcaactttcctggatgaagattttaccactgag
catgcacgacagcgtggtcatactcatttgtttgagattattgaaaatgccaaatggatc
cggagtaaagcaatcttgttgactcatttctcctcccgctacagcatagaggacatacgt
gaagctgtgttgaagttgcaatccagggtgtcagcaaaagtagttcctctgacagaaggt
ttcaaatcaatgtactcatag
DBGET
integrated database retrieval system
