Populus nigra (Lombardy poplar): 133682024
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Entry
133682024 CDS
T10372
Name
(RefSeq) ABC transporter B family member 21-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133682024
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133682024
04147 Exosome [BR:
pnz04147
]
133682024
04090 CD molecules [BR:
pnz04090
]
133682024
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133682024
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133682024
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133682024
CD molecules [BR:
pnz04090
]
Proteins
133682024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
AAA_16
AAA_21
Zeta_toxin
AAA_15
AAA_5
AAA_25
AAA_30
DEAD
AAA_24
AAA_7
DLIC
DUF815
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
133682024
NCBI-ProteinID:
XP_061961245
LinkDB
All DBs
Position
2:41363224..41370140
Genome browser
AA seq
1294 aa
AA seq
DB search
MAVENGRNGDKSMDDASPSKSLEVEEKSSGGRGDQQETVKSKGDEETKTVPFLKLFSFAD
STDILLMILGTIGAVGNGASFQIMSILFGDMLNSFGQNQNNKDVVDLVTKVSLNFVYLGI
GSAVAAFLQVACWMVTGERQAARIRGTYLKTILKQDVAFFDKETNTGEVVGRMSGDTVLI
QDAMGEKVGKFIQLVSTFIGGFIVAFVKGWLLTLVMLSSIPLVVIAGAGLAIIIARMASR
GQTAYAKAATVVEQTIGSIRTVASFTGEKQAISNYKKFLATAYNSGVQEGFTAGLGLGIV
MLLVFCSYALAVWFGGKMILEKGYNGGDVLSVIFAVLTGSMSLGQASPCMSAFAAGQAAA
YKMFETINRKPEIDSSDTRGKILDDISGDVELRDVYFTYPARPDEQIFSGFSLFIPSGTT
TALVGQSGSGKSTVISLIERFYDPQAGEVLIDGTNLKEFQLKWIREKIGLVSQEPVLFAS
SIKDNIAYGKDGATTEEIRAAAELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIA
RAILKDPRVLLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADVIAVIY
RGKMVEKGSHSELLKDPEGAYSQLIRLQEVNKESKQETEYPKESSISEESLRQSSQRISL
KRSISRGSSGVGHSSRHSLSLSFGLPSGFNVPNNPTSELEVSPQKQQTPDVPISRLAYLN
KPEVPVLIAGSIAAILNGVIFPIYSILLSSVIKTFFEPPDELRKDSKFWALMFMTLGLAS
FVVYPSQTYLFSVAGCKLIQRIRSMCFEKVVHMEVGWFDEPEHSSGAIGARLSADAATVR
ALVGDSLSQLVQNIASAVAGLVIAFAASWQLALVILVLVPLIGLNGFVQVKFMKGFSADA
KKMYEEASQVANDAVGSIRTVASFCAEEKVMQLYRRKCEGPMRTGIRQGMLSGTGFGVSF
FLLYSVYATTFYVGAQLVQHGKTTFAEVFRVFFALTMAAIGISQSSSFAPDSSKGKGAVA
SIFAIIDRKSKIDPSDESGTTLDNVKGEIELRHISFKYPSRPDIEIFRDLSLAIHSGKTV
ALVGESGSGKSTVISLLQRFYDPDSGHITLDGIDIQSLQLKWLRQQMGLVSQEPVLFNET
IRANIAYGKEGNATEAEILAASELANAHKFISGLQQGYDTVVGERGTQLSGGQKQRVAIA
RAMVKSPKILLLDEATSALDAESERVVQDALDRVMVSRTTVVVAHRLSTIKNADVIAVVK
NGIIVEKGKHETLIHIKDGFYASLVALHMSASTS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgagaacggcagaaatggtgataagagtatggatgacgcgagcccatcaaaa
agcctggaggtggaggagaagagttctggtggaaggggggaccaacaagagacagtgaag
agtaaaggagatgaggaaactaaaaccgttccctttctcaagctcttttcatttgcggat
tctacagatattttgttgatgatccttgggacgattggtgctgttggaaatggagcatcc
tttcagattatgtcaatactgtttggtgatatgcttaattcttttggacaaaaccagaat
aacaaagatgttgtggatttagttactaaggtgtctctcaattttgtctacttggggatt
ggttctgctgtagcagcatttcttcaggtggcttgctggatggtcacgggagagagacaa
gctgctcggataaggggtacatatttgaaaaccatactgaagcaagacgttgcctttttt
gataaggaaacaaacactggagaggttgttggtagaatgtctggtgacactgttcttata
caagatgctatgggtgaaaaggttgggaaatttatacagctggtatcaacattcattgga
ggcttcatcgttgcatttgttaaagggtggctgcttactcttgtcatgttatcctccatt
cccctggttgtgattgctggtgcaggactggccatcataatagctaggatggcatctcgt
ggccaaactgcttacgctaaagcagcgactgtagtagaacagactattggttcaattaga
acagttgcatcatttaccggggagaagcaagccataagtaattacaagaagtttcttgct
actgcgtataactctggtgttcaagaaggctttactgctggattaggtcttggcatcgtt
atgctacttgtgttctgcagctatgctttggcagtatggtttggtggaaagatgattttg
gaaaaaggatacaatgggggtgatgtgcttagtgtgatttttgctgttttaaccggctct
atgtccctagggcaagcatctccctgcatgagtgcgtttgcagctggtcaagctgcagct
tacaagatgtttgagactataaatagaaagccagagatagattcttccgatacaagggga
aagatattggatgacatcagtggagatgtagagttgagggatgtgtatttcacttatcca
gccagaccagatgagcagatattttctggattctctcttttcatccctagcggaacaact
accgcattggttggacaaagtggaagcggaaagtcaacggtgatcagtctgatagagaga
ttttatgatccacaagctggtgaagttctcatagatggcactaacctcaaagagtttcag
ctcaagtggattcgggagaaaattggtcttgtcagccaagaacctgtgttgtttgcatcc
agcattaaggataacattgcatatggaaaagatggtgcaactactgaagagataagagct
gcagctgaacttgccaatgctgctaaattcatcgataaactacctcagggaatagacacc
atggttggtgaacatggaactcagctgtctgggggacagaaacagagaattgccatagca
agagccattctgaaagatccacgggttttacttttggatgaagctacaagcgcacttgat
gcagaatcggaaaggatagtacaggaggcattagaccggattatggtcaatcgaacgact
gtaattgttgcccaccgtttgagcactgtgagaaatgctgatgtgattgcagttatttac
cgtgggaagatggttgagaaaggttcacattcagaactcctcaaggatcctgaaggagct
tattctcaacttatacgcttacaagaagttaacaaagagtccaaacaagaaacagaatac
cccaaggagtcatctatttctgaagagtccttaagacagtcaagtcaaagaatctcactg
aaacggtccataagtcggggatcatctggtgtaggacatagcagtcgccactcgttgtca
ctgtcatttggtttgccttctggattcaatgtcccgaataatcccacatcggaattagaa
gtttctccacagaaacaacaaactccagatgtcccgatcagccgccttgcgtatctcaac
aagccagaggttccagtgctgattgctggatctatagctgcaattctcaatggggtcata
tttccgatttacagtatactactttccagcgtaattaaaacattttttgaaccacctgat
gaattgagaaaggattccaagttctgggcactaatgtttatgacgcttggcctggcatca
tttgtggtgtatccatcacaaacatacttattttcggtggccggttgcaaattaatccaa
aggatccgatctatgtgttttgagaaggtggttcacatggaggtcggttggttcgacgag
cctgagcactcaagcggagcaattggtgctaggctgtcagcagatgcagcaacagtgcgt
gctctggtcggagattctctttcccagttggttcagaacatcgcatcagctgttgcgggt
ttggtcattgcctttgctgcatcctggcaattggcattggtaatccttgtactcgttcct
ttaataggactcaatggatttgtacaagtaaagttcatgaaaggattcagtgcagatgca
aagaaaatgtacgaggaagcaagtcaagttgcaaatgatgctgttggcagcataagaact
gttgcctctttctgtgctgaagagaaggtgatgcaattatacagaaggaaatgtgaaggc
cctatgaggacaggaataaggcaagggatgctcagtggaacaggatttggagtctctttc
tttttactgtattctgtctacgcaactactttctatgtgggagctcaacttgtccagcat
gggaaaacaactttcgcggaagtttttcgagttttctttgctttaaccatggcagcaatt
ggaatttctcaatcaagctcctttgctcctgattcctcaaaaggcaagggagcagttgct
tccatatttgctattatagaccgaaagtcgaagattgatccaagtgatgagtcgggaacg
acattagacaatgtgaaaggagaaattgaacttcgtcatataagcttcaagtatccaagc
aggccggacattgaaattttccgagacctgagcttggctattcattctggcaagactgtt
gccctggttggagaaagtggaagtgggaaatcaacggtgatctcattattgcaaagattt
tatgatcccgattcaggccatataactcttgatggaattgacattcagagtctccaactt
aagtggttgaggcagcagatggggcttgtgagccaagaacctgttctctttaatgaaaca
atccgtgccaacattgcatatggaaaggaagggaatgcaacggaagcagaaattctagca
gcatcggagctggccaatgcacacaagttcattagtggtttacaacaggggtacgatact
gttgtcggggagcgaggaacccaattgtcaggggggcagaaacaaagggtggctattgct
cgcgctatggtcaaaagtcccaaaatacttctattggatgaggctaccagtgcgctagat
gctgaatctgaaagagtggttcaagatgcactggacagagtaatggtgagtaggactaca
gtggttgtcgcccatcggttatcgacaatcaagaatgcagatgttattgccgtggtgaaa
aatggaattattgtagagaaaggaaagcatgagactttgatccacatcaaagatggcttt
tatgcctccttagtagctcttcacatgagtgcctcaacttcttga
DBGET
integrated database retrieval system
