Populus nigra (Lombardy poplar): 133682191
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Entry
133682191 CDS
T10372
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133682191
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
133682191
Chromatin remodeling factors
BAF complex
133682191
PBAF complex
133682191
GBAF(ncBAF) complex
133682191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133682191
NCBI-ProteinID:
XP_061961454
LinkDB
All DBs
Position
2:complement(43461131..43473818)
Genome browser
AA seq
2256 aa
AA seq
DB search
MHSGGGGGGGPSWVGPAGRAGSTSSAAASPSSSSSSAAVWNLQLGFDSVQQQQQQQQSRQ
ALQQQLLRKPEGNETLLAYQAGTLQGVTGGNNFASSPGSMQIPQQSRQLFDLARQHGSSQ
DGQNRNQGVEQQALNPIQQAYLQYAFQAAQQKSALAMQSQQQAKVGTLGSPAGKDHDMRV
GNLKMQELMSMQSANQAQASSSKNPSEHFSRGEKQVEQGQQQASEQRNEQKSPIQPTAIG
QLMPANVTRPMQAPQVQQNIQNMANNQLTMAAQMQAMQAWALERNIDLAQPANANLMAKL
IPVMQARMAAQLKANENNTGGQSSHPPVSKPHVASPSIANESSPHANSSSDVSGQSGSAK
TRQTVPSGPFGSTSSGGIVNNPNNHTMQQQAFHSRENQAPPRQAVVLGNGMPANASQGAD
HTLPSKNALNSSETSQTQQFRQLNRSSPQSAGPSNDGGSGNHFSSQGRPAVQMAQQRTGF
TKQQLHVLKAQILAFRRLKKGEGTLPQELLQAIAPPPLELQLQQQLLPAGGSNLDRSGGK
IAEDQARHLESNDKGSKAMLSMNGQSFSKEEVFTGDEKATVSTMHMQKAPAVMKEPTPLV
ASGKEEQQTATCSVNSDQETEHGLLKTPVRSDLAADRGRGVASQFPASDAMQAKKPAQAS
TVVQPKDTGSARKYHGPLFDFPFFTRKHDSVGSTGMINTNNNLTLAYGVKDLLSEEGMEM
LNKKRSENLKKINGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDDVDQQQQEI
MAMPDRLYRKFVRLCERQRMELTRQVQASQKAIREKQLKSIMQWRKKLLETHWAIRDART
ARNRGVAKYHERILREFSKRRDDDRNKRMEALKNNDVERYREMLLEQQTSISGDASERYA
VLSSFLTQTEEYLHKLGGKITAAKNQQEVEEAANAAAGAARLQGLSEEEVRAAAACAGEE
VLIRNRFVEMNAPRDSSSVNKYYNLAHAVNERVIRQPSMLRVGTLRDYQLVGLQWMLSLY
NNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHNWLPSV
SCIYYVGGKDQRSKLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKD
RESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQK
EAPMHDGEDDWLETEKKVIIIHRLHQILEPFMLRRRVQDVEGSLPPKVSIVLRCRMSSIQ
STIYDWIKSTGTIRVDPEDEKLRAQKNPAYQPKVYKTLNNRCMELRKTCNHPLLNYPYFN
DLSKDFLVQSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDG
TTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVA
RAHRIGQTREVKVIYMEAVVDKISSCQKEDELRSGGTVDLEDDLVGKDRYMGSIESLIRN
NIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETMHDVPSLQEVNRMIA
RSKDEVELFDQMDEEFDWTEEMTRYDQVPKWLRASSKEVDATIAILSKKPSKAILFADVM
GMVSGEMETERKRVRPKGKKSPNYKEIDDENGDYSEASSDERNGYSAHEEEGEIQEIEDD
ESSGAVGAPPINKDQSEDDGPPCDGGHECHGALESTRNNDVLDEAGSSGSSSDSQRVTRM
ISPVSPQKFGSLSALDARPGSLPKKLPDELEEGEIAVSGDSQDHQQSGSWMHDRDEGEDE
QVLQPKIKRKRSIRLRPRHTVERPEEKSSNDVQRGDSCLLPFQMDHKYQAQLRSDTEMKA
LVEPSGFKHDQIDSSTSRRNLPSKRIAKTPKLHASPKSGRLHLQSAPAEDATEHSRVSLD
GKVPSTSGTSSLGTKMSDVIQRRCKNVIGKFQRRIDKEGQQIVPLLADLWKRIENSGHVS
GAGANLLDLRKIEQRVDRLEYSGVMELVFDVQFMLKGAMQFYGFSHEVRTEARKVHDLFF
DILKIAFPDTDFREARNALSFSGPSSTSISAPSAKQAALGLSKRNKSINNVEPDNSTTHK
PMQRGSIPNSEDIRSVRVPQKETRVGSGSGSTREQYHQDDSPLHPGELVICKKRRKDRDK
SAVRSRTGSSGPISPPSMGRNITSPVLNSIPTDARLNTSPVLNSIPKDARLSQQNTHQQG
WVNQPQPPNGGAGSVGWANPVKRLRTDAGKRRPSHL
NT seq
6771 nt
NT seq
+upstream
nt +downstream
nt
atgcattctggtggtggtggaggaggtgggcccagttgggtaggaccggctgggcgtgcg
gggtccacatcatcggctgcagcatcgccttcgtcttcgtcttcgtctgctgctgtatgg
aaccttcagttgggatttgattcggtacagcagcagcagcagcagcagcagtctaggcag
gcattacagcaacaattacttagaaaacccgaagggaatgaaacccttctagcttatcaa
gctggaactcttcaaggagttacgggagggaacaattttgcttcatctccaggctcaatg
caaatacctcaacagtccaggcaattatttgatttggctcgacaacatggttcctctcag
gacggacagaataggaatcaaggtgttgagcaacaggctttgaacccaattcaacaagca
tatcttcaatatgctttccaggccgcccaacaaaagtcagctttggcaatgcagtctcag
caacaagctaaagtaggaacactgggctctcctgctggaaaggatcatgacatgcgggtg
ggaaatttgaaaatgcaggaactcatgtccatgcagtcggcaaatcaggctcaggcttca
tcttctaagaacccatctgaacatttttctcgtggtgaaaaacaggtggaacaaggtcag
cagcaagcctctgaacagaggaatgagcaaaagtctccaatccagcctactgccattgga
caactaatgcctgcaaatgttactagacccatgcaggcaccacaggttcagcaaaacatc
caaaacatggcaaacaaccagctcacaatggctgctcagatgcaagcaatgcaagcatgg
gcacttgagcgcaacattgatctggcacaacctgcaaatgccaacttgatggcgaagctt
attccagtcatgcaggcaaggatggctgcacaactaaaggcaaatgaaaataatactggt
ggacaatcatcacatccccctgtgtcaaagccacatgttgcttctccatccattgcaaac
gagagttctcctcatgcaaattcatccagtgatgtctctgggcagtctggctctgcaaaa
accaggcaaactgttccatctggtccctttggctcaacttccagtggaggcatagtgaat
aaccctaacaaccacacaatgcagcagcaggcttttcacagcagagagaaccaagcacct
cctcgacaggcagttgtgcttggaaatggaatgcctgcaaacgcaagccaaggtgcagat
catactctgccttcaaaaaatgcattaaacagctcagaaacttcacagacacagcaattc
aggcagctgaatcgatcttctccacaatctgctggtccttctaatgacggaggctcgggc
aaccacttctcttcacaaggcaggccagctgtccagatggcacaacagcgcactgggttc
actaaacagcagttgcatgttctgaaggctcaaattctagcatttaggcgactgaagaaa
ggagaaggtactcttccacaagagcttcttcaagctattgctccaccaccccttgagttg
cagctacagcaacaacttctccctgcaggaggaagtaatctggacaggtcgggtggaaag
attgctgaagaccaagcaaggcatctggagtccaatgataagggttcgaaagcaatgcta
tctatgaatggacagagtttttctaaagaggaagtttttactggcgatgagaaagcaacc
gtctcaaccatgcatatgcaaaaggcaccggctgtgatgaaggaacccactccccttgtg
gcttctgggaaagaagagcagcaaactgctacatgttctgtcaattcagaccaggagact
gaacatggacttctgaaaactcctgttagaagtgatctagcagcagataggggaaggggc
gttgcttcacagtttcctgcatctgatgctatgcaagctaagaaacctgcacaagcaagc
actgtggtccagccgaaagataccggttctgccagaaagtatcatggaccattatttgat
tttcccttttttactaggaaacatgactctgttgggtcaactgggatgattaacacgaat
aataacctaacattggcctatggcgtcaaagatcttctttctgaggaaggcatggaaatg
cttaacaagaaaaggtcagagaatttgaagaaaatcaatggtctactagcagtaaattta
gagaggaaaaggattagaccagatcttgtgttgcggttacagattgaagagaaaaagctt
aggcttttggatctacaggcgcgtttaagggatgacgttgatcaacagcaacaggaaatc
atggcaatgcctgacagactatataggaagtttgttaggctatgtgagcgtcaacggatg
gagctgacaaggcaggtacaggcctctcaaaaagccataagagagaagcaactgaaatcc
atcatgcagtggcgcaagaaacttcttgagactcattgggccatccgggatgcacgtact
gcccgtaacagaggagttgctaaataccatgagagaatattgagggagttttcaaagaga
agggatgatgaccgaaataaaaggatggaggcattgaagaacaacgatgttgaaaggtat
agagaaatgttgttggagcaacagactagcatctcaggtgatgcttctgagagatatgcc
gttctctcgtcattcttgactcagacagaagaatatcttcataagctgggaggtaaaata
acagctgctaagaatcagcaggaagtggaggaggcagctaatgccgcagcaggagctgca
cgactgcagggcctatcagaagaagaagtacgagcagctgcagcttgtgctggtgaggaa
gtattgataagaaaccggtttgtggaaatgaatgcacccagggacagttcatctgttaac
aaatattacaatcttgcacatgctgtgaatgaaagggtcataaggcaaccatctatgtta
cgagttggaaccttacgagactatcagcttgttgggttgcagtggatgctttctttgtat
aacaacaaattaaatggaatcttggcagatgagatggggcttggaaagactgtacaggtg
atggcattgattgcttatctaatggaattcaaaggaaactatggaccacatcttataatc
gttcctaatgctgttttggtgaattggaagagcgagctacacaactggctgccatctgtg
tcctgcatttattatgttggtggaaaggatcagcggtcaaaattattttcccaagaggtt
tctgccatgaaatttaatgtcctcgtgacaacttatgagttcatcatgtatgaccggtca
aaactttctaaagttgattggaagtacatcataattgacgaggcacagagaatgaaggac
agggagtcagttttagcccgtgatcttgatagatatcgctgccagaggcgcttacttctc
acagggacaccattacagaatgacttgaaggagctatggtcgctcttgaatctacttctg
ccagaagtttttgataatcgtaaagcatttcatgattggttctcaaagcccttccaaaag
gaagctccaatgcatgatggagaggatgactggcttgaaactgaaaagaaggtgatcata
attcatcgacttcatcaaattctagagccttttatgctcagacgtcgtgttcaagacgtg
gaaggttcacttccacccaaggtttccattgtcttgaggtgtagaatgtcttctatacag
agtacaatttatgattggatcaaatctactggcactattcgagttgaccctgaggatgag
aagctcagggctcaaaaaaatccagcataccagcctaaggtgtacaaaactttaaataac
agatgtatggagctccgaaaaacttgcaaccatcctttgcttaattacccatatttcaat
gacttatccaaggatttccttgttcaatcttgtgggaaactatggattctggataggatt
ctcataaaacttcaaagaacaggccatcgggtactactctttagtaccatgacaaaactc
cttgatatattggaggaatacttgcaatggcgccgactggtatacagaaggattgatgga
acaactagccttgaagatcgtgaatcggctatcgtggactttaatagccatgattcagac
tgctttattttcttgcttagtattcgtgctgctggaaggggtcttaatcttcagtcagct
gacacagttatcatatatgatcctgatccaaaccctaagaacgaggaacaggcagttgct
agagcccaccggattggacagacaagagaagtcaaagtcatttatatggaagcagttgtt
gacaaaatttctagctgtcaaaaagaggatgaattaagaagtggaggcaccgttgattta
gaagatgaccttgttggtaaggatcgatatatgggttctattgagagcctaataaggaat
aacatccagcaatataagattgacatggctgatgaggttatcaatgctgggcgttttgat
caaagaacaacacatgaggagaggcgaatgactttagagacattattgcatgatgaggag
cggtatcaagaaaccatgcatgatgttccatcactccaagaggttaatcgcatgatagcc
aggagtaaggatgaagttgaattatttgatcaaatggatgaagagtttgattggactgag
gagatgacgaggtatgatcaggtacctaaatggcttcgagccagttcaaaagaagtggat
gctactattgctattctatcaaagaaaccatcaaaagctatcctttttgctgatgttatg
ggtatggtttccggtgaaatggaaactgaaagaaaacgggtgcggccaaaggggaaaaag
tctcctaattacaaggaaatcgatgatgaaaatggagactattctgaggcaagttctgat
gagagaaacggttattctgcacatgaagaagagggagaaattcaagaaattgaagatgat
gaatccagtggtgctgttggggcaccgcccattaataaggaccaatcagaagatgatggt
cccccgtgtgatggtgggcatgagtgtcacggagctttggaaagcactagaaataatgat
gtactagatgaagctggttcctcaggatcatcctctgacagccaaagagttacacgaatg
atctctcctgtctctcctcagaaattcgggtcactttctgcattagatgctagaccaggt
tcacttcccaaaaagctgccagatgaattagaagagggggaaattgccgtgtctggagat
tctcaggatcaccagcaatctggaagttggatgcatgatcgcgatgaaggtgaagatgaa
caggttctgcaacctaagattaaacgaaaacgtagtattcggcttcgaccccgtcacact
gttgaaaggccagaggagaagtctagcaatgatgtgcaacgtggagattcttgtttgttg
ccattccaaatggatcataaatatcaagcacagttgaggagcgatactgaaatgaaagca
ttagtagagcctagtggattcaagcatgatcagattgattcctcaacaagcaggcgaaat
ttaccttcaaaaagaatagccaaaacacctaagttacatgcttcaccaaaatctggcaga
ttgcatttgcagtctgctccagcagaggatgctactgaacactccagagtgagtctggat
ggtaaagttccaagtacaagtggtacttcatctttgggcaccaagatgtctgatgtcatc
cagagaaggtgtaagaatgttattggcaagttccaaaggaggatagacaaggaaggacaa
caaattgtacctcttctagctgatttgtggaagaggattgaaaattctggtcatgtaagt
ggtgctggagctaatcttttggatttacggaagattgaacagcgcgttgacagattggag
tatagtggagtgatggagcttgtgtttgacgtgcaattcatgttaaagggtgcaatgcaa
ttttatgggttctcacatgaggttagaactgaagcaagaaaggtgcatgatctctttttt
gatatcttgaagattgcatttccagacaccgatttccgagaggccaggaacgctctatct
ttctctggcccatcatcaacttccatttctgctccgtctgcaaaacaagctgctcttggc
ctaagcaagagaaacaagtcgataaataatgtggaacctgacaacagcactacccataag
ccaatgcagcgaggatccattcctaatagtgaagacattaggagcgtccgtgtgccccag
aaggaaacaagggttgggagtggaagtggcagtactagggaacaatatcatcaggatgat
tctccactgcatccaggggagttggttatctgcaagaagaggaggaaagaccgggacaag
tcagcagtgaggtcaaggactggatcaagtggtccaatctccccccctagcatgggccgc
aatatcacgagtcctgttttgaattcaatacctacagatgcgagactgaatactagtcct
gttttgaattcaatacctaaagatgcgagactgagccagcagaatacgcatcagcaaggg
tgggtgaaccaaccacaaccaccaaatggtggtgcggggagtgttggttgggcaaatcct
gtaaagaggttgaggacagatgctggtaaaagaaggccgagccatttatga
DBGET
integrated database retrieval system
