Populus nigra (Lombardy poplar): 133682199
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Entry
133682199 CDS
T10372
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133682199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133682199
04147 Exosome [BR:
pnz04147
]
133682199
04090 CD molecules [BR:
pnz04090
]
133682199
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133682199
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133682199
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133682199
CD molecules [BR:
pnz04090
]
Proteins
133682199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
RsgA_GTPase
AAA_16
AAA_21
AAA_15
AAA_30
Zeta_toxin
AAA_5
AAA_25
DEAD
AAA_24
G-alpha
AAA_7
DLIC
DUF815
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
133682199
NCBI-ProteinID:
XP_061961469
LinkDB
All DBs
Position
2:41343249..41349947
Genome browser
AA seq
1288 aa
AA seq
DB search
MAVENGRNGDKSMDDASPSKSLEVEEKSSGGRGDQQETVKSKGDEETKTVPFLKLFSFAD
STDILLMILGTIGAVGNGASFQIMSILFGDMLNSFGQNQNNKDVVDLVTKVSLNFVYLGI
GSAVAAFLQVACWMVTGERQAARIRGTYLKTILKQDVAFFDKETNTGEVVGRMSGDTVLI
QDAMGEKVGKFIQLVSTFIGGFIVAFVKGWLLTLVMLSSIPLVVIAGAGLAIIIARMASR
GQTAYAKAATVVEQTIGSIRTVASFTGEKQAISNYKKFLATAYNSGVQEGFTAGLGLGIV
MLLVFCSYALAVWFGGKMILEKGYNGGDVLSVIFAVLTGSMSLGQASPCMSAFAAGQAAA
YKMSETINRKPEIDSSDTRGKILDDISGDVELRDVYFTYPARPDEQIFSGFSLFIPSGTT
TALVGQSGSGKSTVISLIERFYDPQAGEVLKEFQLKWIREKIGLVSQEPVLFASSIKDNI
AYGKDGATTEDIRAAAELANAAKFIDKLPQGIDTMVGEHGTQLSGGQKQRIAIARAILKD
PRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTVRNADMIAVIYRGKMVE
KGSHSELLKDPEGAYSQLIRLQEVNKESKQETEDPKESSISEESLRQSSQRISLKRSISR
GSSGVGHSSRHSLSLSFGLPTGFNVPDNPTSELEVSPQKQQTPDVPISRLAYLNKPEVPV
LIAGSIAAILSGVIFPIYSILLSSVIKTFFEPPDELRKDSKFWALMFMTLGLASFVVYPS
QTYLFSVAGSKLIQRIRSMCFEKVVHMEVGWFDEPEHSSGAIGARLSADAATVRALVGDS
LSQLVQNIASAVAGLVIAFAASWQLALVILVLVPLIGLNGFVQVKFMKGFSADAKKMYEE
ASQVANDAVGSIRTVASFCAEEKVMQLYRRKCEGPMRTGIRQGMLSGTGFGVSFFLLYSV
YATTFYVGAQLVQHGKTTFAEVFRVFFALTMAAIGISQSSSFAPDSSKAKGAVASIFAII
DRESKIDPSDEPGTTLDNVKGEIELRHISFKYPSRPDIEIFRDLSLAIHSGKTVALVGES
GSGKSTVISLLQRFYDPDSGHITLDGIDIQSLQLKWLRQQMGLVSQEPVLFNETIRANIA
YGKEGNATEAEILAASELANAHKFISGLQQGYDTVVGERGTQLSGGQKQRVAIARAMVKS
PKILLLDEATSALDAESERVVQDALNRVMVSRTTVVVAHRLSTIKNADVIAVVKNGIIVE
KGKHGTLIHIKDGFYASLVALHMSASTS
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgagaacggcagaaatggtgataagagtatggatgacgcgagcccatcaaaa
agcctggaggtggaggagaagagttctggtggaaggggggaccaacaagagacagtgaag
agtaaaggagatgaggaaactaaaaccgttccctttctcaagctcttttcatttgcggat
tctacagatattttgttgatgatccttgggacgattggtgctgttggaaatggagcatcc
tttcagattatgtcaatactgtttggtgatatgcttaattcttttggacaaaaccagaat
aacaaagatgttgtggatttagttactaaggtgtctctcaattttgtctacttggggatt
ggttctgctgtagcagcatttcttcaggtggcttgctggatggtcacgggagagagacaa
gctgctcggataaggggtacatatttgaaaaccatactgaagcaagacgttgcctttttt
gataaggaaacaaacactggagaggttgttggtagaatgtctggtgacactgttcttata
caagatgctatgggtgaaaaggttgggaaatttatacagctggtatcaacattcattgga
ggcttcatcgttgcatttgttaaagggtggctgcttactcttgtcatgttatcctccatt
cccctggttgtgattgctggtgcaggactggccatcataatagctaggatggcatctcgt
ggccaaactgcttacgctaaagcagcgactgtagtagaacagactattggttcaattaga
acagttgcatcatttaccggggagaagcaagccataagtaattacaagaagtttcttgct
actgcgtataactctggtgttcaagaaggctttactgctggattaggtcttggcatcgtt
atgctacttgtgttctgcagctatgctttggcagtatggtttggtggaaagatgattttg
gaaaaaggatacaatgggggtgatgtgcttagtgtgatttttgctgttttaaccggctct
atgtccctagggcaagcatctccctgcatgagtgcgtttgcagctggtcaagctgcagct
tacaagatgtctgagactataaatagaaagccagagatagattcttccgatacaagggga
aagatattggatgacatcagtggagatgtagagttgagggatgtgtatttcacttatcca
gccagaccagatgagcagatattttctggattctctcttttcatccctagcggaacaact
accgcattggttggacaaagtggaagcggaaagtcaacggtgatcagtctgatagagaga
ttttatgatccacaagctggtgaagttctcaaagagtttcagctcaagtggattcgggag
aaaattggtcttgtcagccaagaacctgtgttgtttgcatccagcattaaggataacatt
gcatatggaaaagatggtgcaactactgaagatataagagctgcagcagaacttgccaat
gctgctaaattcatcgataaactacctcagggaatagacaccatggttggtgaacatgga
actcagctgtctgggggacagaaacagagaattgccatagcaagagccattctgaaagat
ccacggattttacttttggatgaagctacaagcgcacttgatgcagaatcagaaaggata
gtacaggaggcattagaccgcattatggtcaatcgaacaactgtaattgttgcccaccgt
ttgagcactgtgagaaatgctgatatgattgcagttatttaccgtgggaagatggttgag
aaaggttcacattcagaactcctcaaggatcctgaaggagcttattctcagcttatacgc
ttacaagaagttaacaaagagtccaaacaagaaacagaagaccccaaggagtcatctatt
tctgaagagtccttaagacagtcaagtcaaagaatctcactgaagcggtccataagtcga
ggatcatctggtgtaggacatagcagtcgccactcgttgtcactgtcatttggtttgccc
actggattcaatgtcccggataatcccacatcggaattagaagtttctccacagaaacaa
caaactccagatgtcccgatcagccgccttgcgtatctcaacaagccagaggttccagtg
ctgattgctggatctatagctgcaattctcagtggggtcatatttccgatttacagtata
ctactttccagcgtaattaaaacattttttgaaccacctgatgaattgagaaaggattcc
aagttctgggcactaatgtttatgacgcttggcctggcatcatttgtggtgtatccatca
caaacatacttattttcggtggccggtagcaaattaatccaaaggatccgatctatgtgt
tttgagaaggtggttcacatggaggtcggttggttcgacgagcctgagcactcaagcgga
gcaattggtgctaggctgtcagcagatgcagcaacagtgcgtgctctggtcggagattct
ctttcccagttggttcagaacatcgcatcagctgttgcgggtttggtcattgcctttgct
gcatcctggcaattggcattggtaatccttgtactcgttcctttaataggactcaatgga
tttgtacaagtaaagttcatgaaaggattcagtgcagatgcaaagaaaatgtacgaggaa
gcaagtcaagttgcgaatgacgctgttggcagcataagaactgttgcctctttctgtgct
gaagagaaggtgatgcaattatacagaaggaaatgtgaaggccctatgaggacaggaata
aggcaagggatgctcagtggaacaggatttggagtctctttctttttactgtattctgtc
tacgcaactactttctatgtgggagctcaacttgtccagcatgggaaaacaactttcgcg
gaagtttttcgagttttctttgctttaaccatggcagcaattggaatttctcaatcaagc
tcctttgctcctgattcctcaaaagccaagggagcagttgcttccatatttgctattata
gaccgagagtcgaagattgatccaagtgatgagccgggaacgacattagacaatgtgaaa
ggagaaattgaacttcgtcatataagcttcaagtatccaagcaggccggacattgaaatt
ttccgagacctgagcttggctattcattctggcaagactgttgccctggttggagaaagt
ggaagtgggaaatcaacggtgatctcattattgcaaagattttatgatcccgattcaggc
catataactcttgatggaattgacattcagagtctccaacttaagtggttgaggcagcag
atggggcttgtgagccaagaacctgttctctttaatgaaacaatccgtgccaacattgca
tatggaaaggaagggaatgcaacggaagcagaaattctagcagcatcggagctggccaat
gcacacaagttcattagtggtttacaacaggggtacgatactgttgtcggggagcgagga
acccaattgtcaggggggcagaaacaaagggtggctattgctcgcgctatggtcaaaagt
cccaaaatacttctattggatgaggctaccagtgcgctagatgctgaatctgaaagagtg
gttcaagatgcactcaacagagtaatggtgagtaggactacagtggttgtcgcccatcgg
ttatcgacaatcaagaatgcagatgttattgccgtggtgaaaaatggaattattgtagag
aaaggaaagcatgggactttgatccacatcaaagatggcttttatgcctccttagtagct
cttcacatgagtgcctcaacttcttga
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integrated database retrieval system
