Populus nigra (Lombardy poplar): 133682364
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Entry
133682364 CDS
T10372
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
pnz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133682364
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133682364
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133682364
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133682364
03036 Chromosome and associated proteins [BR:
pnz03036
]
133682364
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133682364
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133682364
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133682364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
DUF6100
Motif
Other DBs
NCBI-GeneID:
133682364
NCBI-ProteinID:
XP_061961666
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All DBs
Position
2:37917703..37923054
Genome browser
AA seq
541 aa
AA seq
DB search
MIKQILGKLPRKPSRSSSNDSNNDGGLNAHSSLNSSHGANSINNSKPSSNSSKTSNPSLG
ASRLNNGILAPNSKMNQGKKSAPQLGPVMISGVYEALPSFRDVPNSEKPNLFIKKVNMCC
VVFDFSDPSKNLKEKDIKRQTLLELVDYISTVTSKFNEMAMQEITKMVAANLFRTLPSAN
YDNKILEMFDPEDEEPAMEPAWPHLQIVYEFLLRFVASSETDAKLAKRYIDHSFVLRLLD
LFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETERHNGIAEMLEILG
SIINGFALPLKEEHKLFLVRALIPLHKPKCVSMYHQQLSYCITQFVEKDFKLADTVIRGL
LKYWPITNSSKEVMFLGELEEVLEATQAAEFQRCMVPLFHQIGRCLNSSHFQVAERALFL
WNNDHIRNLITQNRRVILPIIFPALERNTRGHWNQAVQSLTLNVRKIFSDADQELFDECL
VKFEEDEVKQMETREKRELTWKRLEDLATSKAVSNEAVLVSSSVSSIAIATGTSPRTTAG
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaatactgggtaagctacctcgaaaaccctcaagatcatcgagtaacgac
tcaaacaatgatggtggactcaatgcccactcgtctttgaactcatcccacggagcgaat
tccattaacaactcaaagccctcttccaattcatccaaaacttcgaatccgagtttgggc
gcttcacgcttgaacaatgggatcctggcaccgaatagcaagatgaatcaagggaaaaag
tcagctccccagttgggtcctgtgatgatttctggggtttatgaggcattgcctagcttt
cgtgatgttcctaattcagagaagccgaatctctttattaagaaggtgaacatgtgttgc
gttgtgtttgattttagtgatccctctaagaatctaaaagagaaggacattaagaggcag
actttacttgagcttgttgattatatttcaactgtgacttcaaagttcaatgagatggca
atgcaagaaattacaaagatggtggcagccaatttgttcagaacacttccatctgcaaac
tatgataacaagattctagaaatgtttgatcccgaagatgaagagccagctatggagccg
gcttggcctcatcttcagattgtttatgagtttctgcttagatttgtggcttcatcagaa
actgatgccaagcttgccaagagatacattgaccattcgtttgttctgagactgctggac
ttatttgattctgaggaccaaagagagagggagtatttgaagacgatactccaccgcatt
tatgggaagttcatggtacatcgaccattcattaggaaggctatcaacaatatcttttac
agattcattttcgagacagagaggcataatgggattgcagaaatgcttgagatattggga
agcattattaatgggtttgctctgccattgaaggaagagcacaagctttttcttgtccgt
gccttaattccacttcacaagccaaagtgtgtatcgatgtatcatcaacaactgtcatat
tgtatcactcaattcgtggagaaagatttcaagctggctgatactgtaattcgaggtctc
ttaaagtattggcccataactaatagttccaaggaagttatgtttcttggtgagttggag
gaggtcttagaggctactcaggcagcagaatttcagcggtgcatggttcctttattccat
caaattggacgctgcctcaacagctcacattttcaggttgcagaacgtgcattgtttttg
tggaacaatgatcacataagaaatttgatcacgcagaatcgcagagtgatactgcctata
atcttcccagctttggagagaaacacaagggggcattggaaccaagctgttcagagtttg
accctgaatgtcaggaagatattctccgatgctgatcaggaactttttgatgagtgcttg
gtcaaattcgaagaagatgaagtgaagcagatggagacacgggagaaaagagaattaact
tggaagcggttggaagatttggcaacctctaaggctgtaagcaatgaggccgtgcttgtc
tcaagttctgtctcgtctattgccattgccactggaacaagtcctcggaccactgcaggt
ggttga
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