Populus nigra (Lombardy poplar): 133682420
Help
Entry
133682420 CDS
T10372
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133682420
Spliceosome [BR:
pnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133682420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
Motif
Other DBs
NCBI-GeneID:
133682420
NCBI-ProteinID:
XP_061961751
LinkDB
All DBs
Position
2:complement(39828227..39835917)
Genome browser
AA seq
439 aa
AA seq
DB search
MAEGKKEKKSSSSSSSSNEESVKLFVGQVPKNMTEAELLAMFKDFALVDEVNIIKDKTTR
ASRGCCFLICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKN
VSEAEVSDLFSKYGTIKDLQILRGSQQTSKSCAFLKYETKEQALAALEDINGKHKMEGSS
VPLVVKWADTEKERQARRAQKAQSQAMPNTDSQHPSLFGALPMGYAPPYNGYGYQAPGVY
GLMPYRLPPMQNQPAFHSMVPPVNQGNVLRGGIRPDLSPNISPRNYAPATYMGSAYPTVT
GLQYPVAYPGAMMTHRPLSSSPGALSPTVVSSNSATPSGGGGSSGVQVEGPPGANLFIYH
IPQEFGDQELANAFEAFGKVLSAKVFVDKVTGVSKCFGFVSYDSPAAAQNAITMMNGFQL
GGKKLKVQLKRDNKQSKPY
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggtaaaaaggagaagaaatcgagcagtagcagcagcagcagtaatgaagag
agcgtgaagctgtttgtgggtcaagtaccaaagaacatgacagaagctgagcttctggca
atgttcaaagacttcgctttggtagacgaagtcaacatcattaaagacaagacaactcgc
gcttccagaggttgttgttttctaatatgtccttccagacaagaagcagacaaggcagtt
aatgcttgtcataataagaaaacattgcccggggcatctagtccgttacaagtgaagtat
gcagatggcgagttggaaaggctagaacacaaactctttgttggtatgcttccaaaaaat
gtttctgaagctgaagtatctgatttattctctaaatatggaactataaaggacttgcaa
atactaagaggttctcaacaaacaagcaaaagctgtgcttttttgaagtacgagacaaaa
gaacaagcccttgctgccctggaggacatcaatggaaagcataaaatggagggttcaagt
gttcctttggttgtcaaatgggcagatacagaaaaggaaaggcaggctcggagagctcag
aaagcacaatcgcaggctatgcctaacactgattcacaacatccgtctttatttggtgcc
ttgccaatgggatatgctcccccttataatggatatggataccaggctcctggagtttat
ggacttatgccgtaccgtctgccacccatgcagaatcagcctgcatttcatagcatggtt
cctccagtaaatcaaggaaatgtattgcgtggtggaatcagacctgacctttcacccaat
atttcccctagaaattatgctcctgctacttatatgggctctgcttatcctacggtgaca
ggtcttcagtatccagtggcatatcctggagcaatgatgactcaccggcctttgagtagt
tcacctggtgcactgtcacccacagttgtgagcagtaattctgcaacaccttcaggtggc
ggtggaagttccggggttcaagtggaaggtccacctggtgctaatttgtttatatatcac
atacctcaggaattcggtgatcaagaacttgccaatgcttttgaagcatttggtaaggtc
ttaagtgccaaggtttttgttgataaagtaactggtgttagcaaatgctttggatttgtt
agttatgactcaccagcagcagctcaaaatgctattaccatgatgaatggattccaatta
ggtggtaagaaattgaaggttcaacttaagagagacaataaacagagcaaaccatattga
DBGET
integrated database retrieval system
