Populus nigra (Lombardy poplar): 133682607
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Entry
133682607 CDS
T10372
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133682607
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133682607
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
Chromo_2
Motif
Other DBs
NCBI-GeneID:
133682607
NCBI-ProteinID:
XP_061962003
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Position
2:44074523..44078884
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AA seq
624 aa
AA seq
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MGVGGKFWDLLKPYARHEGPDFLREKRVAVDLSYWIVQHETAIKATHVRKPHLRLIFFRT
INLFSKFGALPVFVVDGTPSPLKSKARIARFFRFSGVDVSGLPVAEGVSAERNKTFLKCV
QECVELLELFGMPVLKANGEAEALCAQLNAEGLVDACITADSDAFLFGAKCVIKCVKPNT
KEPFECYHISDVEAGLGLKRKHLIAISLLVGNDHDLNGVQGIGLEKALRFVQSFSEDEIL
NQLHEISNGNSPSLQIVSKVVDEIILCPDESPARSKTSHCSFCGHPGSKRAHFKSSCEYC
GTSTSQGCTRKAEGFKCNCSSCNKDRKEKEQQKHENWHIKVCNKISTEPNFPNDDIIRMY
LCNKHGNFTGIGSMMRIASGDGLCVSWRCPDTEILVDFLDFHQHWEPSYVRQRMLPMLST
IYLREMAVKPEKTMLYGQYVFDSIQRVKIRYGYQSYVIRWRKVTSTAGSIVRTNSVEESD
KPQEEIVEIDEFIDHLDEDTAPQIHIDDECCFLLTDENMELIRGAFPEEVERFWHEKELK
ASKRRKGSGFKNEGSSEKSESPKSKRVQLRLTEFYRSAKVAAIHAKQGDLANNSENQEDG
PSKGKNKVSSSNLPKSVRRRLLFE
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgggaggcaaattctgggatttactgaaaccctacgcgcgacatgaaggaccc
gatttcttgagagaaaagcgggtcgcagtggatctttcttattggattgtccaacatgaa
acagctatcaaggcaacccatgttcggaaacctcatcttcgtctcattttcttccgtact
atcaatctcttctccaagtttggagcgcttcccgtatttgttgttgatgggactccgtcg
ccattgaagtctaaagcaaggatagcgaggttttttcggttttcgggggttgatgtttcg
ggtttgccagtggctgaaggtgtgtcggcggagaggaacaagacttttctcaaatgcgtt
caagagtgtgtggaactgcttgaactgtttgggatgcctgttttaaaggccaatggtgaa
gctgaagcactgtgtgctcagttaaatgctgaaggcctcgtggatgcgtgtattacagct
gatagtgatgctttcctttttggggctaagtgtgtgataaaatgcgtcaagcctaatacc
aaagaaccatttgaatgctaccatatatcagatgttgaagctggtcttgggttgaagagg
aaacacttgatagccatttccctcttggttggcaatgatcatgatcttaatggtgtgcaa
gggattgggcttgagaaggctcttcgttttgtccaaagtttcagtgaagatgagatattg
aatcagttacatgaaatcagcaacgggaactctccttcacttcaaattgtttcaaaagtt
gtagatgaaataattctttgtccagatgaaagcccagcaaggtcgaaaacttctcattgc
tccttctgtgggcatccaggcagcaaaagagcacatttcaagtcatcttgtgaatattgt
gggactagtaccagtcagggttgcacaagaaaggcagagggttttaagtgtaattgctcc
tcctgtaataaggatcgaaaagaaaaggagcagcaaaagcatgaaaattggcacataaaa
gtttgcaacaagatatccacggagccaaactttccaaatgatgatattattcgaatgtat
ttgtgcaacaaacatggaaactttactggtattggcagcatgatgaggattgcatctggc
gatggcttgtgtgtatcatggagatgcccagacactgaaatactagttgatttcttggat
tttcatcagcattgggaaccatcttatgttcgacagagaatgcttcccatgttgtccacc
atatatttgagagaaatggctgtcaagcctgagaaaactatgttgtatgggcagtatgta
tttgattctattcagcgtgtgaaaataagatatggataccaatcttatgtgatcaggtgg
agaaaagtgacaagtacagcaggcagtattgtccgtaccaactctgttgaagagtctgac
aagcctcaagaagagatcgttgaaattgatgaattcattgatcatttggatgaggatact
gccccccagattcatattgatgatgagtgttgcttcctgttgacagatgaaaatatggag
cttattcgtggtgcttttccagaagaagttgaaagattttggcatgagaaggaactgaaa
gcatcgaaaagaagaaagggttcaggctttaaaaatgaagggtccagtgaaaagtcagaa
tcaccaaagtcaaaacgtgtccaacttagattaacagaattttaccgctctgctaaggta
gcagcaattcacgcaaaacaaggagatctagccaataattctgaaaatcaagaggatggg
ccatcaaaagggaagaacaaggtttcaagttcaaaccttccaaagtctgtgagacgccgc
cttctgtttgagtag
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