Populus nigra (Lombardy poplar): 133682790
Help
Entry
133682790 CDS
T10372
Name
(RefSeq) threonine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133682790
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnz01007
]
133682790
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133682790
Enzymes [BR:
pnz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
133682790
Amino acid related enzymes [BR:
pnz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
133682790
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133682790
Prokaryotic type
133682790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
133682790
NCBI-ProteinID:
XP_061962295
LinkDB
All DBs
Position
2:complement(37381384..37385129)
Genome browser
AA seq
686 aa
AA seq
DB search
MFVLHKMATSPSSSLCSFSLFLSKPSSLPLLKPPLLSLHSPPLKRFISTASELQHDTQAR
RRTLLGSSYTKTSPLLSLSTAAIATESATVSHIDAAENEETEKLVLPTNDSSEKLLRIRH
TCAHVMAMAVQKLYPEAKVTIGPWIENGFYYDFDMDPLTDKDLKRIKKEMDRIIGRNLPL
AREDVSRDEAQRRIMAVNEPYKMEILESIKEDPITIYHIGDEWWDLCAGPHVESTGNINR
KAVELESVAGAYWRGDEKKPMLQRIYGTAWENEDQLKAYLHFKEEAKRRDHRRLGQDLDL
FSIQDEAGGGLVFWHPKGAVIRHIIEDSWKKTHIEHGYDLLYTPHVAKADLWKISGHLDF
YRENMFDQMKIEDEQYQLRPMNCPYHILVYKRKLNSYRDFPIRVAELGTVYRYELSGSLH
GLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILLQFGFRRYEVNLSTRPEKSVGDD
DIWEKATSALRDALDDKGWSFQIDEGGGAFYGPKIDLKIEDALGRKWQCSTIQVDFNLPQ
RFDVTYVDSNTEKKRPIMIHRAVLGSLERFFGVLIEHYAGDFPLWLSPVQVRILPVTDTQ
LEYCKEVISKLKGNGIRAEVCQGERLPKLIRNAEKQKIPLMAVVGPKEAETETVTIRSRF
SGEVGTIEIDDFISRIKSAIERRTSL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgctacacaaaatggccacatctccttcttcatctctctgctctttctctctt
ttcctctccaaaccctcttcacttcctcttctgaaacccccgttattatccctccactct
cctcctctcaaaagattcatttccactgcatcagaactgcaacatgacacccaagctagg
aggaggactcttcttgggtcttcttataccaaaacaagtcctctactttccctatctact
gcagctattgccaccgagtctgccaccgtttcccatatcgacgcagcagagaatgaggaa
actgaaaaactcgtgcttcccaccaatgattcatccgagaaacttctcagaattcgccac
acgtgtgcacatgtgatggctatggcagttcaaaagctgtatcctgaagctaaagtgaca
attgggccttggatagaaaatgggttttactatgattttgatatggaccctttgactgat
aaagacctcaagaggattaagaaggagatggatcgtatcattggtcgaaatttaccgctt
gcaagggaagatgtttctagagatgaagcacagaggagaataatggctgttaatgaacct
tacaagatggagattttggaaagcattaaagaagatcccatcactatctatcatattggc
gatgagtggtgggatctttgtgcgggacctcatgttgaatctactggaaatattaatagg
aaagctgttgagcttgagtctgttgctggtgcttactggagaggagatgaaaagaaacca
atgctgcagaggatctatggaacagcttgggagaatgaggaccagctaaaagcatacctt
cactttaaagaagaggctaaacgtcgagaccacagacgccttggccaagatcttgatctc
ttttctatacaggatgaagctggtggaggcttagtcttctggcatccaaaaggtgccgtt
attagacatattattgaagattcgtggaagaaaacacatatagaacatggctatgatttg
ttatacactccccatgtggcaaaggcagatctatggaagattagtggtcatctggacttt
tatagggagaatatgtttgatcagatgaagattgaggatgaacaataccaacttcgacct
atgaattgcccttaccatattctggtatacaaaagaaagctcaactcttatcgtgatttc
ccaatcagggttgcagagctaggaacagtatatagatatgagttgtctggaagcttacac
ggtcttttccgtgtaagaggttttacccaggatgatgcacatatattttgcttagaagat
caaatcaaagatgaaattaggggtgtcctggatcttacagaagagatactattgcaattt
ggtttcagacggtacgaagttaatctgtcaactaggcctgaaaaatctgtgggagatgat
gatatatgggaaaaagcaacatctgcccttagagatgctttggatgacaaggggtggagc
tttcaaattgatgaaggtggcggtgccttttacggtccaaaaattgatcttaagattgag
gatgctcttggaagaaagtggcagtgctctactatacaggttgatttcaatttacctcag
agatttgatgttacttatgttgattcaaacacggagaaaaagcggcctatcatgatacat
agagcggtgcttggatccttggagcggttttttggggtcctcatagagcattatgctgga
gactttccattgtggctttctccagtacaggtccgcattttaccagtaacagacacacag
cttgaatattgcaaagaggtgatcagcaaactgaaaggcaatggtattcgggctgaagtt
tgccaaggcgagcgcctgccaaagctcattagaaatgcagagaagcagaaaattccttta
atggcagttgtgggccccaaggaggctgagacggaaactgttacaattagatctaggttt
agtggggaggttgggaccatcgaaattgatgattttataagcagaatcaagtcagccatt
gaaaggagaacttcattatga
DBGET
integrated database retrieval system
