Populus nigra (Lombardy poplar): 133682816
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Entry
133682816 CDS
T10372
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00520
Amino sugar and nucleotide sugar metabolism
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
133682816
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pnz01003
]
133682816
Enzymes [BR:
pnz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
133682816
Glycosyltransferases [BR:
pnz01003
]
Polysaccharide
Structural polysaccharide
133682816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
zf-UDP
Baculo_IE-1
Xin
Motif
Other DBs
NCBI-GeneID:
133682816
NCBI-ProteinID:
XP_061962330
LinkDB
All DBs
Position
2:40564057..40568442
Genome browser
AA seq
1166 aa
AA seq
DB search
MVKRASSPCSSPVTITVSSGGKGGGSRSMGLTSPVPRASISNNPNSPLSNSRNRTPSGGR
YCSMSRDDTTEEINSELVSYTVHIPPTPDHQSFSASQTSLAEDITNAAKPERSFISGTIF
TGGFNSVTRGHVIDCSMENNESLKSGIVCGMKGCDEKAIRGKCECGFKICRDCYLDCVGS
NGGGHCPGCKEPYKDADDEAEDDDDYDYDEAKSEADDQALPLPKLDKRLSLVKSFKAQSH
PPDFDHTRWLFETKGTYGYGNAVWPKDGYGAGSGANGFEPPPDFGERSRRPLTRKVGVSA
AILSPYRLLIMIRLAALGLFLTWRIRHPNREAMWLWGMSITCELWFGVSWILDQLPKLCP
VNRVTDLSVLKQRFESPSLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDY
PVEKLACYLSDDGGSLLTFEALAETASFARIWVPFCRKHNIEPRNPEAYFGQKRDFLKNK
VRLDFVRERRRVKREYDEFKVRINSLTESIRRRSDAYNAHEELRARKNQMEMGGNPSEIV
KVPKATWMSDGSHWPGTWTSGEADHSKGDHAGVIQAMLAPPNAEPVYGVEADGENLLDTT
EIDIRLPMLVYVSREKRPDYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLAL
REGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTG
CIFRRTALYGFSPPRTTEHYGWFGRKKIKLFLRKPKAAKKQEDEMALPINGEQNSDDDDA
DIESLLLPKRFGNSTSLAASIPVAEYQGRLLQDLQETGKQGRPAGSLAVPREPLDAATVA
EAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPI
NLTDRLHQVLRWATGSVEIFFSRNNALFATRRMKFLQRVAYFNCGMYPFTSMFLIVYCVL
PAISLFSGQFIVQSLSVTFLVLLLAITITLCLLAILEIKWSGITLHDWWRNEQFWLIGGT
SAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDVDDEFADLYVVKWSFLMVPPITIMMLN
LIAIAVGVARTLYSPFPQWSRLVGGVFFSFWVLSHLYPFAKGLMGRRGRVPTIVYVWSGL
LSIIISLLWVYISPPGTQDYMKFQIP
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaagggctagttctccatgttcatctccagtaaccataacagtctcctcagga
ggcaaaggaggaggaagtagaagcatgggcttaactagtccagtaccaagagcttccatt
tcaaacaacccaaattcccctcttagcaacagtagaaacagaaccccaagtggaggcaga
tactgttcaatgtccagagatgataccacggaggagattaattcagagctcgtctcctac
actgtccatatacctcccactccagatcaccagagcttctcagcttcacagacaagccta
gctgaagacatcactaatgctgccaaacctgagaggagtttcatttctggtactattttc
actggtgggttcaattctgtcacacgcgggcatgtaattgattgctcaatggaaaacaac
gagtctctgaaatctgggattgtttgtggaatgaaaggttgtgatgagaaagcaattagg
ggaaaatgtgaatgtgggttcaagatttgtagggattgttatttagattgtgtagggtct
aatggagggggccattgtcctggttgcaaggaaccatacaaggatgctgatgatgaagct
gaggatgacgatgattatgattatgatgaggctaaaagtgaagcagatgatcaggcacta
ccattgcctaaattggataagaggctttcacttgtgaagtcgtttaaggcgcagagccat
cctcctgattttgaccatactaggtggttgtttgagacgaaggggacttatggttatgga
aatgctgtgtggcctaaagatgggtatggtgctggatcaggtgctaatggatttgagcct
cctccagattttggagagagaagtaggaggcctttgaccaggaaggttggggtttctgct
gcaattctcagcccttacagactactcatcatgatacgtcttgcggctcttggtctattc
ctaacatggagaatccgacaccccaatcgcgaagcaatgtggttatgggggatgtccata
acttgtgagttatggtttggtgtgtcatggattcttgatcagctccctaagctctgccct
gtaaacagagtgactgacctctctgtgctgaaacagcgctttgaatcccccagtcttcga
aacccaaaaggccgatcagaccttccaggcattgatgtgtttgtttccacggctgaccct
gaaaaagagcctcctttggtcactgcaaacaccatcctttcgatccttgcagttgattat
ccggtagaaaagctggcttgttacttatcagatgatggtggatcacttttgacgtttgaa
gctctggctgagacagctagctttgccagaatttgggttcctttctgtaggaaacacaat
atagaacccaggaaccctgaggcttattttgggcagaaacgcgattttcttaagaacaaa
gtgagacttgattttgttagagagaggagaagagtaaagagagaatatgatgaatttaag
gtgaggatcaattcactgacggagtcaattaggagaagatcagatgcctataatgcccat
gaagagcttcgagcgaggaagaatcagatggaaatggggggcaatccatcagaaattgtg
aaggtaccaaaggctacctggatgtcagatggttctcattggccgggaacttggacttct
ggagaagcagaccactcaaaaggagaccatgcaggtgtaatccaggctatgctagctcct
ccaaatgcagaacctgtttatggtgtagaagcagatggtgaaaacttgcttgacaccaca
gaaattgatatcagattgccaatgttggtctacgtgtctcgagagaaaaggccagattat
gatcacaacaagaaagctggggcaatgaatgctttagtgagaaccagcgcaatcatgtca
aatggtccattcattctgaatctggactgtgatcactacatctataactccttggctttg
agggaagggatgtgctttatgcttgataggggtggtgataggatctgttatgttcagttc
ccacaaaggtttgaagggattgatccaagcgatcggtatgctaaccataatacagtattc
tttgatgtgagcatgagagctcttgatggcctacagggtcctatgtatgttgggacaggt
tgtattttccgcagaactgctctttatgggtttagtcctcctagaactacagagcactac
ggatggtttggtaggaagaaaattaaactgttcttgaggaaacccaaggccgcaaagaag
caagaggatgagatggctttgccaatcaatggggagcagaatagcgatgatgatgatgca
gatattgagtctttgcttctgcctaaaaggtttgggaactctacttctctagctgcatcc
atcccagttgcagaataccagggaaggctgcttcaagatttgcaagaaacgggtaaacaa
ggaagaccagctggttcccttgcggtgcctcgtgagcctttagatgctgcaactgttgca
gaggcaattagtgttatctcttgtttctacgaggacaaaactgagtggggaaagagagta
ggatggatatatggttcggtaacagaggatgtggtgactggttatcgtatgcacaataga
ggatggaggtcgatttattgtgtaaccaaaagggatgcatttcgaggcacagcacccatt
aatctaacagacaggctccaccaagtccttcgatgggcaacaggctcggtagaaatcttc
ttttcacggaacaatgctctatttgctactcgccggatgaaattcttacagagggtggca
tatttcaactgcggaatgtaccctttcacatccatgtttctcatagtttattgcgtccta
cctgcaatttctcttttttctggccagttcatagtccaatccctcagtgtgacctttcta
gtcctcttgttggccatcaccatcaccctatgcttgcttgcaattctagaaatcaaatgg
tcaggaatcacacttcatgattggtggcgaaacgaacagttttggttgattggtggaaca
agtgcccatcctgcagcagttttacaaggactactgaaggttatagcaggagttgacatc
tcattcactttgacatctaaatctgccacgcctgaagatgtagatgatgaatttgctgac
ttgtatgtggttaagtggagctttttaatggtccctcctattacaataatgatgctgaac
ctgattgcaattgcagtaggagttgcaagaactttgtatagcccatttccacagtggagc
aggctcgttggaggagtgttcttcagcttctgggttttgtcccatctttacccctttgcc
aaaggcttgatgggaaggaggggaagggtcccaaccattgtctatgtgtggtccggattg
ctctccatcatcatttctttgctgtgggtgtacattagtcctcctggaacacaagactac
atgaagtttcagatcccttga
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