Populus nigra (Lombardy poplar): 133682952
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Entry
133682952 CDS
T10372
Name
(RefSeq) LOW QUALITY PROTEIN: exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Module
pnz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133682952
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
133682952
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
133682952
NCBI-ProteinID:
XP_061962464
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Position
2:complement(37378849..37380472)
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AA seq
392 aa
AA seq
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MAAGVAYHLCFLLLVTQVKGSNFDVKAYGAKANGMTDDTKAINSAWKDACAAKEASTVVI
AKGNYMVGPLKFEGPCTAPVTVKVQGTLKATADPKRLRDDWVAFRNVEGLTVSGGGIFDG
QGAIAWSVNNCAKTGKCNSLLTNLQFTKLTNSKIEGITSLNSKLFHMNILNCNNVTFQNI
VINAPKNSLNTDGIHIGRSTMVNITGATIKTGDDCVSLGDGCQQINVEKVTCGPGHGISI
GSLGRYHDEQPVHGVTVRNCTLQNTENGVRIKTWPASPSGVASNVNFEDIIMKNVSNPIL
IDQEYCPYNNCLAKVPSRVKISDVRFEGIRGTSATQVAVKIVCSRGLPCQNVSVEDINLV
YNGKEGSSTSLCANVKPQVSGKVFPATCTPSA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaggagttgcataccatttgtgcttcttgctattagtcacccaagtaaaaggt
tcaaattttgatgtgaaagcctatggagcgaaggctaatggcatgacagatgataccaag
gctataaatagcgcttggaaagatgcatgtgctgccaaagaagccagcacggtggtgata
gcaaaagggaactacatggtcggtccactgaaattcgaaggaccttgcacagcccctgta
acggtgaaggttcaaggaactctcaaggctacggcagaccccaagcgactgcgtgatgat
tgggtcgctttccggaatgtcgaaggattaactgtctcaggcggtggaatattcgatggt
caaggagcaattgcttggtccgtaaataattgtgcgaaaactggaaaatgcaattccttg
ctcacaaatttacaattcacaaagctgaccaactcaaaaatagaagggataacgtccctg
aacagcaagctgtttcacatgaacattttgaactgcaataatgtgaccttccaaaacatt
gtgatcaacgcacccaaaaacagcctcaacactgatgggattcatatcggtcgatcaact
atggtcaatattacgggcgcaaccataaaaactggggatgattgtgtctcgcttggcgat
ggctgccaacaaataaacgttgagaaagtaacctgcggaccaggccatggcattagtata
ggaagccttggcagataccatgatgaacaaccagtacatggagttacagtgaggaattgc
accctccaaaacactgaaaatggtgttaggattaaaacatggccagcttcccccagtggc
gtagcttcaaatgttaattttgaggatattatcatgaaaaatgttagcaaccctattctt
attgaccaagaatactgcccttataataactgcctggcaaaggttccctcgcgtgttaag
atctccgatgttagattcgaaggcatacggggcacctctgcaactcaagtggcagtgaaa
attgtttgtagcagaggcctgccatgccaaaatgtttctgttgaggatatcaacttggta
tacaatggaaaagaagggagctcaacatctctatgcgcaaacgtgaagccccaagtctcc
gggaaagtatttccagccacctgtactccgtctgcttaa
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