Populus nigra (Lombardy poplar): 133683074
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Entry
133683074 CDS
T10372
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133683074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133683074
Spliceosome [BR:
pnz03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
133683074
Complex B
133683074
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
xRRM
Calcipressin
Motif
Other DBs
NCBI-GeneID:
133683074
NCBI-ProteinID:
XP_061962570
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All DBs
Position
2:complement(40390693..40394229)
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AA seq
254 aa
AA seq
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MALQEREEMGDNNNSTGTDVSQNMTIYINNLNEKIKIDELKTSLHAVFSQFGKILEILAF
KTLKHKGQAWVIFEDVQSASNAIRQMQSFPFYDKPMRIQYAKTKSDIIAKADGTFVPREK
RRRHEEKGKKKKDQHDANQVGAGLTPAYGGAYGTTPSLLQIPYPGGVKSMVPEAPAPPNN
ILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFK
ILQQNSMLITYAKK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcattacaagagagagaagaaatgggagataacaataatagtacaggcactgatgtc
tcgcagaacatgactatttacatcaacaatctcaacgagaagatcaaaatcgatgagttg
aagacatcgctgcacgctgtgttctcgcaattcgggaagatactggagatattggcattc
aagacattgaaacacaaagggcaagcttgggttattttcgaggatgttcagtctgcctct
aatgctatacggcaaatgcagtctttccccttttatgataagcccatgagaatacaatat
gcaaaaactaaatcggatatcatagcaaaagctgatggtacttttgttccacgggaaaaa
cgaaggaggcatgaggaaaaagggaaaaagaagaaagatcaacatgatgctaatcaagtg
ggagcgggtctgacccctgcttatggcggcgcctacgggacaacaccttctctattacaa
ataccctatccaggtggtgtgaaatctatggttcctgaggctccagctccaccaaacaac
attctgtttattcaaaatcttccaaatgagactaccccgatgatgctgcaaatgctcttc
cagcagtatcccggttttaaggaggtcaggatggtggaagcaaagccagggattgccttt
gtagagtatggagatgagatgcaatcgacaggcgcaatgcatggacttcagggattcaag
atacttcagcagaattcaatgttaattacctacgccaagaaatag
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