Populus nigra (Lombardy poplar): 133687769
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Entry
133687769 CDS
T10372
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like isoform X1
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00730
Thiamine metabolism
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
133687769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133687769
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
133687769
Ribosome biogenesis [BR:
pnz03009
]
Prokaryotic type
GTPases
133687769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_16
AAA_29
nSTAND1
AAA_23
AAA_22
AAA_21
SMC_N
AAA_28
AAA_15
Guanylate_kin
ATP-synt_ab
RNA_helicase
AAA_33
AAA_7
Roc
IIGP
Septin
Motif
Other DBs
NCBI-GeneID:
133687769
NCBI-ProteinID:
XP_061963063
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All DBs
Position
3:complement(25272374..25275861)
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AA seq
481 aa
AA seq
DB search
MQTPSSLSLFRHRTPTFFRHHPLLITASRHHQNQPNVSRKQPPSKNLLKAKKNLTSKKDF
SNLSPILSPDHTPTNLSDSQAIGTVAASQANFMRVIVTAEPEKIEDSSSSSSKVGTELLC
VVRAVLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSDILDPPVANVDRLLVLFSV
EQPQLESFVLTRFLIEAESTGIPITLALNKAELVDQQVLSDWDTRLRSWGYEPLFCSVDS
KMGLDSLASVLRDQTTVIVGPSGVGKSSLINALRNKPNSQVEVDNWFDPIMGSKWFEDQR
VGKVSTRSGRGKHTTRNVSLLPLGGGGYLADTPGFSQPSLLKVTKQSLAQYFPEIRKMLG
DNEQAKCAFNDCLHVGEPGCIVKGDWERYPLYFQLLDEIRIREEFQLRTFGTKREDDVRY
KVGDMGVKQAEPRLEPKKHRRQSRKRINQSILDELNELDDDEDLLDDENDPILRALKNEN
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccccttcttcactatccctcttccgccatcgcactcccaccttcttccgccac
caccctctccttatcaccgcatccagacaccaccaaaaccaacccaatgtctcccgcaaa
caaccaccaagcaaaaacctcctcaaagccaaaaaaaacctaacttccaaaaaagacttc
tccaatctctctccgatcctctcccctgaccacacccctaccaacctctccgattctcaa
gccatcggcaccgtcgccgcttcccaagcgaacttcatgcgcgtgattgtcaccgccgaa
cctgagaagatagaagattctagtagtagtagtagtaaagttggaactgaattgctatgc
gtggttcgggcggtgttgaagaagataaaacggagagtcttggttggtgataaggtggtg
gttgggtcaattgattgggtagataggagaggaatgattgagaatgtttttcaacggagt
tcggatattttagacccgccggtagcgaatgtggatcggttgttggttcttttttcggtt
gagcaaccacagttggaatcatttgtgttgactaggtttttgattgaggccgaatctact
gggattccgattactctcgcgttgaataaagcagaacttgtcgatcaacaggtgttgagt
gattgggatactagattgagaagttggggttatgagcctctcttttgtagtgttgattcg
aaaatggggcttgatagtttggcttctgttttgagagatcaaacgacagtgattgtgggt
ccaagtggagttgggaaatctagcttgattaatgctttgaggaataaacccaattcccaa
gttgaagtagataattggtttgaccctataatgggtagcaagtggtttgaagatcagcgc
gttggtaaagtttcaacgagaagtggtagagggaagcacactacacgtaacgtctctttg
cttccgcttggtggaggtggttatctcgctgatactcctgggtttagccaacctagtttg
ttgaaagtaacaaagcaatctcttgcccagtattttccagagataaggaaaatgcttggt
gacaatgaacaggctaaatgtgcattcaatgattgcttgcatgttggcgaacctgggtgc
atagtaaaaggggattgggaaaggtatcccttgtatttccagcttcttgatgagatcaga
atcagggaagaatttcagttaaggacatttggaaccaagagggaagatgacgtaaggtac
aaggttggagacatgggtgtcaagcaagcagagccacgtttggagcccaagaagcataga
agacagtctcgcaaaaggattaaccaatcaatactagatgagttgaatgaacttgatgat
gacgaagatttgttggatgatgaaaacgatcctatcttgagggcactcaagaatgaaaat
ctttag
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