Populus nigra (Lombardy poplar): 133687997
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Entry
133687997 CDS
T10372
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133687997
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133687997
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133687997
microRNA pathway
RISC loading complex
133687997
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
133687997
NCBI-ProteinID:
XP_061963345
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Position
3:25242950..25251017
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AA seq
914 aa
AA seq
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MESTDEPEALPPPPPEIPPNVVPVQLTTDSVPEETKKISKPKRSPIARRGVGSRGQKIQL
LSNHFKVSISNTGGHFFHYCVSLSYEDGRPIDAKGIGRRLIDKVHETYGSDLAGKDFAYD
GEKSLFTIGALPRNKMEFTVLLDSFSSNRNSGNGSPVGNGSPNETDKKRMRRAFQSKTFK
VEMSFAAKIPMQAIAAALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQSFFHDDPKN
YVDLGGGVLGCRGFHSSFRTSQGGLSLNIDGSTTTIIQPGPLIDFLIANQNVSNPFQIDW
AKAKRTLKNLRIRVSPTNQEYRITGLSENTCKEQMFSLKSRASDGNDVESVDITVYHYFV
NHRSIDLRYSGDLPCINVGKPKRPTYIPVELCSLLPLQRYIKALTVLQRSQLVEKSRQKP
QEKIRILTDVMKSNNYAAEPMLRSCGITISSQFTQVQGRVLTAPKLKAGNGEDVIPRNGR
WNFNHKKFFEPSKIENWAVVNFSARCDVRGLVRDLIRFGEMKGILISDPVDVVEENGQFR
RAPPLVRVEKMFEQIQKAFPNAPPRFLVCLLPDRKNSDIYGPWKRKNLAEYGIFNQCLAP
TRVNEQYILNVLLKINAKLGGLNSLLAMEQSRNIPFVSKVPTIIFGMDVSHGSPGQSDMP
SIAAVVSSRNWPLLSRYRASVRSQSPKVEMVDSLFTLTPDKKDDSGIVRELLLDYYRSSG
QTKPAQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDESWSPKFTVIVAQKNHHTKFFQ
DGSPDNVPPGTVIDNAVCHPQSYDFYMCAHAGMIGTTRPTHYHVLLDEIGFSADDLQELI
HSLSYVYQRSTTAISVVAPVRYAHLAATQISQFLKCDDMSETSSSHGGLTSAGQTPVPEL
PELHRNVCSSMFFC
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggaatccactgacgagccagaggccctccctccacctccacctgagataccgccaaat
gtagttcctgttcaattgacaacagactctgttccggaggaaacaaaaaagatatcaaaa
ccaaaacgttccccgattgccaggcgtggagttgggtctagagggcaaaaaatacaactg
ctctctaatcatttcaaagtttccatctctaatactggtggccacttttttcattactgt
gtttccttgtcttatgaggatggtcgccctattgatgcaaagggcattgggagaagatta
attgataaagttcatgagacttatggctcagaccttgctgggaaggactttgcatatgat
ggggagaagagcttatttacaattggtgctctgcctcgaaacaaaatggaattcactgtt
ttgcttgatagtttctcatcaaataggaattctggaaatggcagtcctgttggcaacgga
agtccaaacgagactgataaaaagaggatgaggagggcattccagtccaaaacatttaaa
gtggagatgagttttgctgccaaaatccctatgcaggctattgcagctgctttgcgtggt
caagaatcagaaaactcacaggaagccttaagagtcttagacatcattttaagacagcat
gcagccaaacagggttgccttcttgttcgccagtcattctttcatgatgatccaaagaac
tatgttgatctgggaggaggtgtccttggatgccgaggatttcattcgagctttagaacc
tcgcagggtggattatccctaaatatagatggttcgactacaacgataatacagcctggg
ccccttattgactttctcatagccaaccagaatgtgtcaaacccctttcagattgactgg
gcaaaggctaagcgaacattgaaaaatctgaggataagggtgtcacctaccaatcaagag
tacagaatcactggcttgagtgaaaatacttgcaaagagcaaatgttctctctgaaatca
agagcatctgatggaaatgatgttgaaagtgttgacattacagtttaccattattttgta
aatcatcgcagcatagatttacgctactctggagatttgccttgcatcaatgttggcaag
cctaaaaggcccacttacattcctgtcgagctttgttcactgcttcccttgcaacgctat
ataaaggcactaactgtccttcagagatcacagttagtagaaaaatcaagacaaaaacca
caagaaaaaattaggatcttaactgatgttatgaaaagcaacaactatgctgcagaacca
atgttgcgttcttgtggtatcaccatcagcagccagtttactcaagttcaaggccgtgtc
ctaactgctccaaagttaaaggcaggaaatggcgaggatgttattccaagaaatgggcgg
tggaattttaatcataagaaatttttcgaaccttctaaaattgaaaactgggctgtggtg
aacttttctgctcgttgtgatgtgcgtggtctagtcagagatttgataagatttggagaa
atgaaagggattctcataagtgacccagtggatgttgttgaagagaatggtcagtttcga
cgggcaccgcctcttgttcgagtggagaagatgtttgaacagatacagaaagcatttcca
aatgcacctcctcgctttctcgtgtgtcttcttcctgataggaagaactctgacatatat
ggtccttggaaaagaaagaatcttgcagaatatggaattttcaatcaatgcctggcaccc
actagagttaatgagcagtatatacttaatgttctcctgaagataaatgccaagcttggt
ggtttgaattctttgttggccatggagcaatcacgaaacatcccattcgtctcgaaggtt
cctacaataatatttggaatggatgtatcacatggttcgcctggtcagtctgacatgccc
tccattgctgcggttgtcagttctagaaactggcctctactttctcgttatagagcttct
gtgcgtagtcagtcaccaaaagttgagatggtagattctctttttacactaacaccggat
aagaaagatgattctgggattgtcagggaattgttgttggactactataggagttctggc
caaacaaaaccagctcagataatcatattcagggatggagttagtgagtcacagttcaat
caagtcctcaacatcgagctggatcaaatcattgaggcatgcaagttccttgatgaaagc
tggtcacccaaattcactgttattgttgcacagaaaaatcatcacactaaatttttccaa
gatggatctccagacaatgttcctcctggaactgttattgataatgctgtttgtcaccca
caaagctatgatttctacatgtgtgcacatgcagggatgataggaacaacaaggccaaca
cattatcatgttcttttagatgagattggcttttcagctgatgatctacaggagttgatt
cactctttgtcttatgtgtaccaaagaagcacaacagcaatatctgtagttgctcctgtc
cgttatgctcacttggcagcaactcagatttcacaattcttgaagtgtgatgacatgtca
gagacatcctcgagccatggaggtctaacttctgctgggcaaacccctgtgcccgagctt
cctgagctacaccggaatgtctgcagctctatgtttttctgctga
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