Populus nigra (Lombardy poplar): 133688143
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Entry
133688143 CDS
T10372
Name
(RefSeq) serine/threonine-protein kinase ATG1c
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133688143
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pnz01001
]
133688143
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133688143
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133688143
Enzymes [BR:
pnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133688143
Protein kinases [BR:
pnz01001
]
Serine/threonine kinases: Other
ULK family [OT]
133688143
Membrane trafficking [BR:
pnz04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
133688143
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
133688143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
Kdo
ATG1-like_MIT2
APH
Pkinase_fungal
YrbL-PhoP_reg
FragX_IP
Motif
Other DBs
NCBI-GeneID:
133688143
NCBI-ProteinID:
XP_061963520
LinkDB
All DBs
Position
3:19922200..19929633
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AA seq
724 aa
AA seq
DB search
MAQASGRSGRVVGDYLVGRQIGSGSFSVVWHARHRVLGTEVAIKEIVTNRLNKKLQESLM
SEIFILKRINHPNIIRLHDIIKVPGRILIVLEYCEGGDLSMYIQRHGKVPEAIAKHFMQQ
LGAGLQILRDNNLIHRDLKPQNLLLSTSDNNAVLKIADFGFARSLQPRGLAETLCGSPLY
MAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPYTGNNQIQLLQNIVKSAELQFPFDNKD
LSAGCKDLCRKLLCRNPVERLTFEEFFNHPFLSQRKKDELLRSSRSVDGFPFTGSSPARN
ADDNSQEDCLPFLLDDDSSCPEGSPSVSKRMSPMKSTYGFSLDSRIGGRDATSNVFNNVD
LTSRYSSARQNLENASFRPGINKASDENINEPPKSIDQRSVNIRSRVVDSLDLIDQDYVL
VSGPPLNVSSSTASTYKPGNAPYKSEGPSQAFTYTNTRLSIPVPIIDTANNNPCRFGSLE
IPASAPGTSEGSLDMGDALEQPSTHCMTRIKSLQHCASAIMELVVEKIEAGRQLEAFSIQ
LVILAIWKQVLHICHTQAASAIEGSPSQESSRLRKSSSRKHGNPDTEDCPDVGPENMSTQ
IEAEFLQEVERAEELAKAIETGSTEMPDAMEMIFQSALSLGRHGGVDELMGNMENAALLY
SRAGCLLVFLLVEAPSLFLNPPFSLTNSDRYRLRSYIDILNNRQDHSRSQRMALLKCEDQ
RCSP
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcttcagggaggagcggcagggttgttggagactacttggtgggtagacaa
atcgggtcgggctctttctcggtggtttggcacgctagacaccgagtccttggaaccgaa
gtagcgataaaagagatcgttacgaatcgacttaataagaaattacaagaaagtctcatg
tctgagatttttattttgaagaggatcaatcatccaaatatcattcgcttgcacgatatt
attaaggttccggggagaatacttatagtattggagtattgcgagggtggtgatctgtct
atgtatatccaacgccatgggaaagttccagaagcaattgctaagcacttcatgcaacaa
ttaggtgctggtttgcaaattctccgggacaataatttgattcatcgggatcttaagccg
cagaatctccttctctccacgagtgacaataatgcggttctgaaaattgcagactttgga
tttgccagatctctacaacctcgaggccttgcagaaaccttgtgtggctcacccctctac
atggctccagagataatgcaacttcagaagtatgatgcaaaggcagatctctggagtgtt
ggtgccattttatttcagcttgtgacaggaaaaaccccatacactggaaacaatcaaata
cagttgctccagaacattgtgaaatcagctgaattgcaatttcctttcgataataaggat
ttgagtgctggctgcaaagatttatgccggaaattgctatgtcgcaatccagtggaacgg
ctaacctttgaggagttctttaatcacccatttctttctcaaaggaaaaaagacgaatta
ttgaggtcttcaaggtcagtagatggctttcctttcactggaagcagtcctgcaaggaat
gctgatgacaattctcaggaggattgcctgcctttccttctggatgatgattctagttgt
cctgagggtagcccttctgtttctaagaggatgtccccaatgaagtctacatatggattt
tctcttgattcaagaattggagggagggatgcaacatctaatgtttttaataatgtggat
cttacttccagatatagtagtgccagacagaacttagaaaatgctagttttaggcctggc
atcaataaagcatcagatgaaaatataaatgaacctccaaaatccatagaccagagatca
gtgaacatccgatcaagagttgtggattcactggatttgatagatcaagattatgttctt
gtttctggaccccctttgaatgtgtcatcttccacagcaagtacttacaaaccaggcaat
gcaccatacaagtcagagggtccctctcaagcatttacctacacaaacactaggctaagt
atcccggtgcccataattgacactgccaacaataatccttgccgctttggaagcttggaa
attccggcctctgctcctgggacttctgaaggatctttggatatgggagatgctttggag
cagccatcaactcactgcatgactaggattaagtcattgcagcattgtgcatctgccata
atggaactagtggtggaaaagattgaggcaggtaggcaactagaagcattttcgatccaa
cttgttattcttgcgatttggaagcaagtactgcacatctgccatactcaggctgcctca
gctatcgaaggaagtccaagccaagagagctcaagactgaggaaaagcagcagcaggaag
catgggaaccctgatacagaagattgtcctgatgttgggccagagaatatgtccactcag
attgaggcggaatttttacaggaagttgagcgggcagaggaacttgccaaggctatcgaa
actggaagtacggagatgcctgatgcaatggagatgatatttcaatctgccctttctctg
ggaagacatggaggggttgacgagctcatggggaatatggaaaatgcagctttgctatat
tcaagagcaggatgtttgttagttttccttctagtggaagcaccatctctttttctcaat
cctccattttctctcacgaactcggatcggtataggctccgcagttacatagatatcctt
aataacaggcaagaccattcacgatcccaaaggatggcacttctcaaatgcgaggatcaa
cgatgctcaccatag
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integrated database retrieval system
