Populus nigra (Lombardy poplar): 133688272
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Entry
133688272 CDS
T10372
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Module
pnz_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133688272
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
133688272
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
133688272
NCBI-ProteinID:
XP_061963682
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Position
3:2165008..2168858
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AA seq
424 aa
AA seq
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MKKYTGYSLLRDGITVLHSELLLATVFIFGIATSNIGFGDASKPFNVLSFGAVGDGKTDD
SPAFTKAWGALCGASGGTPTLVIPPGRAFSLKPVKFEGPCKSNSVHIQVAGNIVAPSTVA
AWGGCGILFWLCFSNVNGLVLDGSGHIDGRGSQWWNHGQQCKAPEKALLFNNNNNLKLSG
LNVVNSPRSHVNLNDCKGVSISGLKITAPGNSPNTDGIDVSCSSHVSIVDSTIGTGDDCI
AIKGGCSNINITGINCGPGHGISIGSIGENGATEQVEEVHVRNCNFTGTENGARIKTVPG
GSGYVRRITFEQITLNAAGSPIIIDQHYCDGKKEGCPDQPKAVAVSDVTFTGVRGTSSDE
QVITLDCAAIGCNNIRMVQVAITSSVAGKRRTAFCRNAHGTSVSTAPAVPCLSGRAFARK
FLTH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtatactgggtattcactcttgagagatggtataacagtgttacattcagag
ttgttgctcgccaccgtttttatctttggtattgctacatctaatattggcttcggagat
gcctcgaagcccttcaatgtgttgagttttggtgccgttggagacggcaaaactgatgat
tccccagcttttacaaaagcatggggagctctgtgtggagcgagtggaggcacaccaaca
cttgtaataccacctggccgtgcattttcattgaaacctgtaaaatttgaaggtccttgc
aagtccaacagtgttcacattcaggtagcagggaacattgtagctccgagcaccgttgcc
gcatggggtggctgtggaattctgttctggctatgtttctctaacgtaaacggcctggtc
ctggatggatcaggccatattgatggtcggggctcacagtggtggaatcatggacagcag
tgcaaggcaccagaaaaggctctgctcttcaacaacaacaataaccttaaattaagtgga
cttaatgttgtcaacagtccgaggagccatgtcaacttgaacgattgcaagggtgtctct
atctccggccttaaaatcactgcacctggaaacagtcctaacactgatgggatcgacgtg
tcttgttcaagccatgtcagcatagtcgactctaccataggaacaggtgatgattgtatt
gctataaaggggggctgctccaacatcaatattactggcatcaactgcggaccaggtcat
ggaattagcataggaagtataggagagaatggagctactgaacaagtggaggaagtccat
gtgcgaaattgtaacttcaccggaactgagaatggagcgagaatcaagacagtcccgggg
ggatcagggtatgttaggaggatcacattcgagcaaataacgcttaatgcagctggaagc
cctattataattgaccagcactactgcgatgggaagaaagagggctgccccgaccagcca
aaggcagtagcggtgagcgacgtgacattcaccggtgtccgaggaacatcttctgatgag
caagtaatcacgttggattgtgcagcaataggttgcaataacattagaatggttcaagtc
gcaatcacatcatcagttgctgggaagcgaagaacagcattttgccgcaatgctcatgga
acatccgtctccacagcacccgcggttccgtgcctctcagggagagcatttgctaggaag
ttcttgacacattga
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