Populus nigra (Lombardy poplar): 133688449
Help
Entry
133688449 CDS
T10372
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
133688449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133688449
Membrane trafficking [BR:
pnz04131
]
SNARE
SNAP-25[C] (Qc)
STX8
133688449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
SPAM
NPV_P10
DUF7032
YjcZ
HAUS1
ATG16
GAT
Motif
Other DBs
NCBI-GeneID:
133688449
NCBI-ProteinID:
XP_061963917
LinkDB
All DBs
Position
3:complement(24992489..24995206)
Genome browser
AA seq
232 aa
AA seq
DB search
MATPSGSWMQEFNEASKLGDEINGMINGKNSLPPSGPETQRHLSATRRKIAILRTKLDIL
QSLLTALPSKQPITGKEMNRLQDMLKNLSTKVNQMATTLNMSSDANRENLLGPDKKTDDD
VVNRASGLDNHGLVGFQRQIMKEQDEGLEKLEETVTSTKHIALAVNEELTLHTKLLDDLD
EHVDVTNSRLQTVQRKLALLNKRTKGGCSCLILPVIAIVILIVVIQGLFKYL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgccatcggggtcatggatgcaagaattcaatgaagcatcaaaacttggtgat
gaaattaatggtatgattaacgggaagaattctttgcctccatcaggaccagaaacacaa
aggcatctttctgcaactaggagaaagatcgctattttgagaactaaacttgatattttg
cagtcccttttgacagcacttcctagcaagcagccaataacagggaaagagatgaatcgg
cttcaagacatgctgaaaaatttgagcactaaagttaaccagatggctactactctcaat
atgtccagtgatgctaacagagagaacttgcttgggcctgataagaagacagatgatgat
gtagtgaatagagcatctggcttggacaaccatggtcttgttggctttcaacggcaaatt
atgaaagaacaagatgagggccttgaaaaattggaggagacagtgacgagtactaaacac
atcgcactggctgtcaacgaggaacttaccctacacactaagcttctggatgacttagac
gagcatgtggatgtaacaaattcccgtctacagactgttcaaaggaaactggctcttctg
aacaaacgcactaaaggcggttgctcttgcttgatcttaccggtcatcgccattgtcatt
ctaattgtggtaatccaggggctgtttaaatatttgtaa
DBGET
integrated database retrieval system