Populus nigra (Lombardy poplar): 133688657
Help
Entry
133688657 CDS
T10372
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00040
Pentose and glucuronate interconversions
pnz01100
Metabolic pathways
Brite
Enzymes [BR:
pnz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133688657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133688657
NCBI-ProteinID:
XP_061964211
LinkDB
All DBs
Position
3:complement(17301032..17304991)
Genome browser
AA seq
486 aa
AA seq
DB search
MLTISCIVLTLILSSFSPLGSAMLNRTLLTPHPNPEEVVQEVQRRVNASVSRRQTLQVLS
QEDQSTCLTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYAMGGKNGEYYIVTDSSDDDA
VNPRPGTLRYAVIQPQPLWIVFPTNMLIKLSQELIFNSYKTLDGRGANVHISGGGCITLQ
YISNVIIHNIHIHHCVQSGNTNVRSSPTHFGYRTKSDGDGISIFGSKDIWIDHCSLSHCK
DGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDDYSPDSGMQVTIAFNHFGEKLVQRMPR
CRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSNRNAKEVTKRVDTAEDDWRG
WNWRSEGDILVNGAFFVASGAELEVKYEKAYSVEPKSAVLIDLLTMHSGVLGVGGRNNNL
GMWSTGSNGGKEGLGSGEGDDYLDDYSGSSISLPPPSPYALLPILTALIYLLSFQYIIEA
ALTSML
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaataagctgcattgtcctaactctgattcttagctcattttctccacttggg
tcggcaatgcttaaccgcacccttctcaccccacaccccaaccctgaagaagttgttcaa
gaagttcagagaagagtaaatgcttccgtatcaagaaggcaaacgctacaagtactatct
caagaagatcaatccacatgcctaacaggtaaccccatagatgattgctggaagtgtgac
ccagactggcccaacaatcgccagaggctggcggattgcgctattgggttcgggcagtac
gcaatgggtggcaagaacggtgaatattatatagtgaccgactcctcggatgatgatgct
gtcaatccaaggccaggaactctcagatatgctgtgatacaacctcagcccctttggatt
gtgtttcccactaacatgctcattaaattgtcccaagaactcatttttaatagctataaa
acccttgatggacgtggggctaatgttcacatttcgggtggtggctgcattactctgcag
tatataagcaatgttattattcacaacatacacattcaccattgtgttcagtcaggtaat
actaatgtgcgttcaagcccgacccactttgggtaccggaccaagtcggatggtgatggc
atttccatcttcggctccaaagacatatggattgatcactgctcactttctcattgtaag
gacggtctgattgatgctgtgatggggtccacagggatcacaatatcaaacaactttttc
tcccatcacaatgaggttatgctgctaggtcacagtgatgattactcgcctgactccggg
atgcaggtgaccatagccttcaaccactttggtgagaagttggtgcagagaatgcctaga
tgtagaagagggtatattcatgtggtgaacaatgattttacacagtgggaaatgtacgct
attggtggtagtggtaaccctaccattaacagccaagggaatcgttacacagctccttcc
aatcgcaatgctaaagaggttacgaagcgggtggacacggctgaagatgattggagaggt
tggaattggagatcggagggagacatattggttaatggagcattttttgtggcctcaggt
gcggaactagaggtgaagtatgagaaggcctacagtgtggagcccaagtcagctgttctc
attgacctcctcaccatgcactctggcgtcctcggtgttggtggcaggaacaacaatctg
ggaatgtggagcacagggtcaaatggcggcaaagagggattaggatccggcgaaggcgat
gactatttggatgactactccggtagcagtatttcgttgccacctccctctccatatgct
cttcttcctattttgactgcactgatctacctgttatctttccagtacattatagaagca
gcactgacatccatgttgtag
DBGET
integrated database retrieval system
