Populus nigra (Lombardy poplar): 133688712
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Entry
133688712 CDS
T10372
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133688712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133688712
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
133688712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA_25
AAA
AAA_33
nSTAND3
RsgA_GTPase
AAA_28
ABC_ATPase
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
133688712
NCBI-ProteinID:
XP_061964269
LinkDB
All DBs
Position
3:2469891..2477436
Genome browser
AA seq
1450 aa
AA seq
DB search
MDGAGDIYRVSSARLSTSSNIWRNSIPEAFSRSSRDEDDEEALKWAALEKLPTYLRLTRG
ILTEEEGKAREIDIMNLGLVEKRDLLERLVKIAEEDNERFLLKLKERIDRVELEIPTIEV
RFEHLNVEAEAYVGGRALPTILNFSANMLEGFLSFLHLLPSRKQPFPILRDVSGIINPRR
MTLLLGPPSSGKTTLLMALAGKLGKDLQCSGSVTYNGHGMEEFVPQRTSAYISQFDLHIG
EMTVRETLSFSARCQGVGPRYEMLTELSRREKEANIKPDPDLDIYMKAAALEGQETSVTT
YYILKITGLDICADTMVGDEMIRGISGGQKKRLTTGEMLVGPARALFMDEISTGLDSSTT
FQIVNSLRQTTHILNGTTLISLLQPAPETYDLFDDVILLSDGLIVYQGPRENVLEFFESL
GFKCPERKGVADFLQELTSRKDQEQYWASRDQPYSFVSAKEFSEAFQSFHIGRKLGDELA
IPFDKSKSHPSALSTEKYGVSKKELLKACISREFLLMKRNSFVYIFKFTQLILLASIAMT
VFLRTEMHRNTITDGGIYIGALFFAIIVIMFNGFSELVMTIVKLPVFYKQRDLLFYPPWA
YAIPTWILKIPITFVEVAIWTTMTYYAVGFDPNIGRFFKQYLIFVLANQMSSGLFRMMGA
LGRNVIVANNVGSFALLAVLVMGGFILSRDNVKSWWIWGYWVSPLMYVQNAVSVNEFLGN
SWRHIPPSSTESLGVTLLKSRGVFPEARWYWIGVGALIGYTLLFNFLFTLALKYLNPFGK
PQAILSKEALAERDANRTGNFIELSTRGKSSSERGKDSKTNSSARAPSLRMPSLGDANQN
KRGMVLPFQPLSITFEEIRYSVDMPQEMKAQGIPEDRLELLKGVSGAFRSGVLTALMGVS
GAGKTTLMDVLSGRKTGGYIDGRISISGYPKNQQTFARISGYCEQTDIHSPHVTVYESLV
YSAWLRLSPDVDSETRKMFIEEVMELVELNPLREALVGLPGVDGLSTEQRKRLTIAVELV
ANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFDAFDELFLLKR
GGEEIYVGPVGRHACHLIKYFEEIEGVPKIKDGYNPATWMLEVTSAAQEAVLNDNFTDIF
KNSELYRRNKALIKELSAPPPGSKDLYFPTRYSQSFFTQCMACLWKQHWSYWRNPPYNAV
RLLSTTVIALMFGTIFWNLGSKRNRKQDIFNSMGSMYAAVLFIGVQNATSVQPVVAVERT
VFYRERAAGMYSALPYAFAQVMIEIPYTLAQALIYGVIVYSMIGFEWTAIKFFWYIFFMY
FTLLYMTFYGMMNVAITPNHSIASLVSSAFYAIWNLFSGFIIPRTRVPIWWRWYCWACPF
SWTLYGLIASQYGDLEDKVEGDETVKDFLRNYFGFRHDFVGICAIVVVGMSVLFAFIFAF
SIKTFNFQRR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgctggtgatatatacagagtaagtagtgcacgtttaagcacttcttctaat
atatggaggaatagtatccctgaagctttttcaaggtcttctcgtgatgaagatgatgaa
gaagctctaaaatgggctgctttagagaaactccctacttatttacgtttgacaagaggt
attttaactgaagaagaaggtaaagcaagagagattgatattatgaaccttggtttagta
gagaaaagggatttgttagagaggcttgtcaagattgctgaagaagataatgagaggttc
ttgttgaagctcaaagaaaggattgacagagttgaactggaaattccaacaattgaagtc
aggttcgaacatttgaatgttgaagcagaagcttatgtaggaggtagagcgttgcctaca
atattaaacttctctgctaacatgttagaggggttcttgagttttcttcacttgcttcca
agtagaaagcagccatttcccattcttcgtgatgtcagtggaatcatcaaccctcgtaga
atgacactgcttttaggccctccaagctcaggcaagaccactttactaatggctttggct
ggaaaacttggtaaagatttgcagtgttcaggaagtgttacttacaatggacatgggatg
gaagagtttgtaccacagaggacatcagcttacattagtcaatttgatcttcatatagga
gaaatgactgtgagagaaacactgtctttctctgcgagatgtcagggggtcggaccgcgt
tacgagatgttaactgaattatcaagaagggagaaagaagcaaatataaaaccagatcct
gaccttgatatttacatgaaggcagcagcactagaagggcaagagactagtgtgacaaca
tattatattctcaagattacaggacttgatatatgtgctgataccatggtgggcgatgaa
atgatacgaggcatctccggtggacaaaagaagcgactcactacaggtgagatgttagtt
ggaccagcaagggcacttttcatggacgagatatcaactggtttggacagttcaacaaca
ttccaaatagtgaactcactcaggcaaacaacacacatcctcaatggaactactctcatc
tctctacttcaaccagcaccagaaacctatgatcttttcgatgacgtaattcttctgtca
gatggactaattgtgtaccaaggtccacgtgaaaatgttcttgaattctttgaatcattg
ggttttaaatgtccggagaggaaaggagttgctgacttcttacaagaattgacatcaagg
aaagatcaagagcagtactgggcaagtagagatcagccttacagctttgtttcagccaag
gagttctctgaagcattccaatcatttcatattggtcgaaaactaggtgatgaacttgct
ataccatttgacaagtccaaaagccacccttctgctctatcaactgagaaatatggtgtc
agcaagaaggaactcttgaaagcttgcatttcaagagaatttttgctcatgaaaaggaac
tcatttgtctacattttcaaattcacacaacttattcttttagcttccatagcaatgaca
gtatttctaagaacggagatgcaccgcaacacaataacggatggtgggatttatatcggt
gctcttttctttgctatcattgtcattatgttcaatggcttttcagagcttgtcatgacc
atcgtgaagcttcctgttttttacaagcaaagagaccttctcttctatcctccatgggca
tatgccatacctacatggattctcaagatcccaatcacctttgtagaagttgccatatgg
accaccatgacatattatgctgtaggctttgatccaaacattggaaggtttttcaagcag
tacttgatattcgtattggctaaccagatgtcatctgggctcttccgaatgatgggagca
ctaggaaggaacgtaattgtggccaacaatgttggttcatttgcattgcttgctgtacta
gttatgggaggattcatcttatcaagagataatgtgaagtcctggtggatatgggggtac
tgggtctcgccgttaatgtatgtgcagaacgccgtgtctgtcaatgaatttcttgggaat
agttggagacatattcctcctagttcaacagagtcattaggagttactttattgaagtct
cgtggagtttttccagaagcacgttggtattggattggagtaggagctttgataggatat
accttgcttttcaacttccttttcaccttggctctaaaatatctcaacccatttgggaag
cctcaggcaattttatcaaaagaggccttggctgaaagagatgccaacagaactggaaat
tttattgaactatcaacaagaggaaagagctcttcagaaagagggaaagacagcaaaaca
aattcctcagctagggcaccatctttaagaatgcctagccttggtgatgccaatcaaaat
aagcgaggaatggttctcccttttcaaccgctttctatcactttcgaagaaataagatat
tcggtagacatgccgcaggaaatgaaggctcaaggtattcctgaggatcgtctggaactt
ttgaagggtgtcagtggtgctttcaggtcaggagtcctaacagctctaatgggagttagt
ggtgccggcaagaccactttaatggatgtattatctggaagaaaaaccggtggttatatt
gatggaagaataagtatatcaggatatccaaagaaccagcaaacatttgctcgcatttca
ggatactgtgagcaaactgacattcactcccctcatgtgactgtctatgaatccttggtt
tattccgcatggcttcgactttcccccgatgttgattcggaaacaagaaagatgttcatt
gaggaggtcatggaacttgtggaattgaaccctttaagagaagcacttgttggattgcct
ggtgtggatggtctctccaccgagcagcgcaagaggttgacgattgcagttgagcttgtt
gctaatccatccataattttcatggatgagccaacatctggccttgatgccagggcagca
gccatagttatgagagcagtgaggaacacagtggatactggaagaactgtagtgtgcaca
atacaccaaccaagcatagacatatttgatgcttttgacgagctatttttgctgaaaagg
ggaggtgaggaaatttatgtgggtccagtaggccgccatgcttgccatctaatcaagtat
tttgaggaaattgagggagttccaaagattaaggatggttacaatcctgcaacttggatg
ttggaggttacttcagcagcacaagaagcagttctcaatgataacttcaccgatatcttc
aagaactcagaactatacaggagaaacaaagccttgatcaaagagctaagtgctccgcca
ccgggttcaaaagatctatacttcccaactcgatattcacagtccttcttcacccagtgc
atggcttgcctatggaagcagcattggtcatattggcgaaacccaccgtacaatgcagtg
agactgttatccacaacagtcatagctttaatgttcgggaccatattttggaatttgggc
tccaaaagaaatagaaaacaagatatatttaattcgatgggttctatgtatgccgctgtt
cttttcataggagtgcagaatgctacatcagtgcagccagttgtcgctgttgagagaaca
gtcttttacagagaaagagcagctggaatgtattctgcattgccatatgcctttgcacag
gttatgattgaaattccatacactttagcccaggctcttatatatggagttatagtgtac
tccatgatcggtttcgaatggacagctatcaagttcttttggtacatctttttcatgtat
ttcaccttattatacatgactttctatggcatgatgaatgttgccatcacgccaaaccac
agcattgcttctttagtttcatctgcattctacgcaatatggaaccttttctcaggattc
atcattcctcgaacgagggttcctatctggtggagatggtactgctgggcatgtccgttc
tcgtggaccctctatggattgattgcttcacaatatggagacctcgaggataaagtagag
ggtgatgaaacagtgaaagatttcttgaggaattatttcggctttcggcatgactttgtt
ggaatctgtgcaattgtagttgttgggatgtctgtgctatttgccttcatctttgcgttc
tccattaaaacatttaacttccagagaagatga
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