Populus nigra (Lombardy poplar): 133688933
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Entry
133688933 CDS
T10372
Name
(RefSeq) DNA replication licensing factor MCM5-like
KO
K02209
DNA replication licensing factor MCM5 [EC:
5.6.2.3
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133688933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnz03032
]
133688933
03036 Chromosome and associated proteins [BR:
pnz03036
]
133688933
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133688933
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
133688933
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
133688933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
MCM5_C
MCM_N
Mg_chelatase
AAA_5
AAA_3
Motif
Other DBs
NCBI-GeneID:
133688933
NCBI-ProteinID:
XP_061964571
LinkDB
All DBs
Position
3:7827389..7832774
Genome browser
AA seq
726 aa
AA seq
DB search
MSGWDEGAVYYSDQAQFPESGTDAAAATPSRHTILRKFKEFIRNLETDKNVFPYRESLIN
NPKSLLVHLEDLLAFDAELPSLLRSSPSDYLPLFETAAAEVLQSLRLKEQGESGEMKEPE
TKEVQILLSSKEDPVSMRMLGAQYISKLIKIAGITIAASRVKAKATYVSLVCKNCQSTRE
VPCRPGLGGAMVPRSCDHVPQAGEEPCPIDPWIVVPDKSKYVDQQTLKLQENPEDVPTGE
LPRNMLLSVDRHLVQRIVPGTRLTIIGIYSIFQAANSSASHRGAVAVRQPYIRVVGIEEV
NEASSRGHAAFTKEEVEEFKKFASRTDAYEVICSKIAPSIFGEENVKKAVACLLFGGSRK
NLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSS
SREFYLEGGAMVLADGGVVCIDEFDKMRPEDRVAIHEAMEQQTISIAKAGITTVLNSRTS
VLAAANPPSGRYDDLKTAQENIDLQTTILSRFDLIFIVKDKRDYGRDKIIASHIIKVHAS
ANKTSGDSRTAKEENWLKRYIQYCRTECHPRLSESASSRLQNEYVRFRQDMRKQANETGE
ASAVPITVRQLEAIIRLSEALAKMKLSHVATEADVIEAVNLFKVSTVEAAQSGINQQVTL
TPEIKQAETQIKRRLGIGMRISERKLIDELARMGMNESIVRRALIVMHQRDEIEYKHERR
VIVRKV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtgggacgaaggagcggtgtactacagcgaccaggcgcagttccctgaatcc
ggaaccgatgcggcggctgcaactccaagccgccacaccatcctccgcaaattcaaggaa
ttcatacgaaacttggagactgataaaaatgttttcccataccgtgaaagtctcattaac
aatcctaaatctctccttgtccaccttgaagatctcctcgctttcgatgctgagcttcct
tccctcctccgctcctctccctccgattacttgcccttgtttgagacggcggcagcggag
gtgttgcagagtttgaggttgaaggaacaaggagagagtggggaaatgaaggaaccggag
acaaaagaagtgcagattttgttgagttctaaggaggatcctgtttcaatgcgaatgctt
ggggctcaatatatttctaagctgatcaagatagctgggattaccatagctgcttcaagg
gttaaggcaaaggcaacttatgtgagtctagtgtgtaagaattgtcaaagtacaagggaa
gttccatgtcgtccaggccttggtggggcaatggtgcctcgttcgtgcgaccatgttcct
caggctggtgaagaaccatgccccattgatccttggattgtggttcctgacaagagcaag
tatgttgatcagcaaaccttgaaattgcaggaaaatccagaggatgtccctactggagag
cttccaagaaacatgcttctctccgtggatcggcatcttgttcaaagaattgtacctggc
acgcgattgaccatcatagggatttatagtatctttcaagcagccaattcatcagcctcc
catagaggagcagttgcagtgagacaaccttatatcagggtagttggaatagaagaagta
aacgaggccagttctcgaggtcatgcagctttcacaaaagaagaggtagaagaattcaaa
aaatttgcctcgagaacagatgcatatgaagtcatatgctccaagattgctccctctata
tttggagaagagaatgtgaagaaagctgtggcttgtcttttatttggaggatcgagaaag
aatttgccagatggggtgaagttgagaggtgatattaatgtgttacttttgggtgaccca
tctactgcaaaatcacagtttcttaagtttgttgagaagaccgctcctgtagcagtatat
acttctggaaaaggctcatcagctgctggtcttacagcttctgttatacgagatagcagc
tcacgtgaattttatcttgaaggaggagccatggttttggccgatggaggtgttgtctgt
attgatgagtttgacaaaatgaggccagaggatagagtggctattcacgaagccatggag
cagcaaacaatatccattgcaaaagcaggaataacaaccgtactcaattctaggacatca
gtgcttgcagctgccaaccctccatcaggtcgttatgatgatctcaagactgcacaagag
aatatcgatttacagacaacaattctttctagatttgacttaatcttcattgtgaaggat
aaaagagactatggtcgagataagattatagctagccatatcattaaggttcatgcttct
gctaataaaacctcgggtgatagcagaactgctaaagaagagaattggctgaaaaggtac
atacaatactgtcgaactgaatgccatccccggctgtcagagtccgcatccagtagattg
caaaatgagtacgtcagattcagacaggatatgagaaagcaggcaaatgaaactggggag
gcatctgctgtacccattactgtaaggcagctggaagctatcataagattgagtgaggct
cttgcaaaaatgaaattgtcccatgttgccactgaggcggatgttattgaagcagtaaat
ctttttaaggtgtctactgtcgaagcagcacagtcgggaataaatcaacaagtaactctt
actcctgagataaagcaagcagaaactcagataaagagaagactgggaattggtatgcgc
atatcagaaagaaagctgattgatgaacttgccagaatgggaatgaatgaatcaattgtg
agacgagccctaatagtaatgcaccaaagggatgaaatagaatataagcatgaaaggcgt
gttattgtccggaaagtataa
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