Populus nigra (Lombardy poplar): 133689150
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Entry
133689150 CDS
T10372
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133689150
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133689150
mRNA cycle factors
Common to processing body (P body) and stress granule
133689150
Spliceosome [BR:
pnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133689150
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133689150
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133689150
NCBI-ProteinID:
XP_061964909
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Position
3:6935350..6940758
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AA seq
608 aa
AA seq
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MRTSWADSVASENAASGLSGPRPTRATYIPPHLRNRPPSSDFLAPPPAAPSLGNDRVGYG
GPAGGSRWGGGGGSASKPDSGRLGYGSGGRGGGGGWNNRMERGREREVNPFDDDGDAEPA
FGVQENTGINFDAYEDIPVETSGQNVPPPVNTFAEIDLGDAVNQNIRRCKYVKPTPVQRN
AIPILLAGRDLMACAQTGSGKTAAFCFPIIAGIMREQYVQRPHGGRTVYPLALILSPTRE
LSCQIHDEAKKFAYQTGVKVVVVYGGAPVNQQLRELERGVDVLVATPGRLVDLVERARVS
LQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPCGRRQTMLFSATFPKEIQRLASDFL
SNYIFLAVGRVGSSTDLIVQRVEYVHETDKRSHLMDLLHAQRETEVNGKHSLTLVFVETK
KGADSLEHWLYVNKFPATSIHGDRSQQEREMALRSFKSGKTPILVATDVAARGLDIPHVA
HVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNLSLARPLADLMQEANQEVPAWL
TRYASRVSFSGGKNRRSVGARFGGRDMRRDGSFNRGTDYYGGNSSSGGYGVSAGYGGGYN
PAVASAWD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcatgggcagattctgtggcatctgagaatgcagcatctggtttgtctggt
ccgcgtcctactcgtgccacttacattccgccacaccttcgtaaccggccaccatcttct
gatttcctggcgccaccacctgctgctccgtcattagggaatgatcgtgtaggttatggt
gggcctgcgggtggttctcgatggggtggcggtggtggcagtgcttcgaaaccggattct
gggcgcttaggttatggttctggtggtagaggaggtggtggtggttggaataatagaatg
gaacgtgggagggagcgtgaggtgaatccatttgatgatgatggtgatgcagagccggct
tttggcgtgcaagagaatacaggaattaactttgatgcgtatgaggatattcctgtggag
acgagtgggcaaaatgtgccaccacctgtgaatacctttgcagagatagacctgggtgac
gcagtgaatcagaatattcggagatgcaagtatgtgaagccaactccagtgcagcgcaat
gcaatcccaatattgcttgctgggagggacctgatggcttgtgctcagacagggtcaggc
aagacagctgccttttgctttccaataattgctggaattatgcgggagcagtatgtgcag
agaccacatggagggaggacagtgtacccactggctctcattctttctcctacaagggag
ctttcgtgtcagatacacgatgaagccaaaaaattcgcctatcaaactggtgtcaaggtg
gtggtagtttatggaggtgctccagtcaaccaacagttgcgagaacttgagagaggggtt
gatgttctagtggcaactcctggacggttagtggatttggttgagagggctagagtgtca
ttgcagatgatcagatatttagcacttgatgaggcagacaggatgctggatatgggattt
gaacctcagattagaaagatagtggaacaaatggacatgcccccatgtggcaggagacag
acaatgctgttcagtgccacctttcctaaagaaatacagagacttgcatctgattttctt
tcaaattacatatttttggctgtcggaagggtcggttcgagtactgatttaattgttcaa
agagttgaatatgttcatgagactgacaagagaagtcatctcatggaccttcttcatgct
cagagagaaactgaagttaatggcaagcattctctgacgttagtttttgtggagacaaag
aagggagccgactcattggaacattggttgtatgtcaataaatttcctgctacatcaatt
catggagatagatcacaacaggaaagagaaatggcacttagatcattcaagagtgggaag
acgccaattctagttgcgacagatgtggcagcaaggggtcttgatataccccatgtggct
catgtggtgaattttgatcttccaaatgacattgatgattatgttcatcggatagggcga
acagggcgagctggaaaaacaggtctggctacagcattttttaatgagaataatttgtca
ttagcaagacctctagctgatcttatgcaagaagcaaatcaagaagtgcctgcctggctc
acccgttatgcttcacgggtttcatttagtggtggcaagaatcggcgctctgtgggagcc
cgttttggtggccgtgatatgagaagggatggctcttttaacaggggtacagattattat
ggaggaaacagtagtagcggtggatatggggtttctgctggttatggtgggggttacaat
ccagctgtagccagtgcttgggattag
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