Populus nigra (Lombardy poplar): 133689160
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Entry
133689160 CDS
T10372
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133689160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133689160
Enzymes [BR:
pnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
133689160
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
133689160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
133689160
NCBI-ProteinID:
XP_061964922
LinkDB
All DBs
Position
3:complement(3543020..3549545)
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AA seq
790 aa
AA seq
DB search
MVGSQSPNGTAAKRYGIMKPISVAGPTEPDLHRNAELEKFLVDSGLYESKEEAMKREEVL
GRIDQIVKDWVKRLTRQRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVN
REGDFFIVLHDKLAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVPEDLDI
SNGSVLYEVDEQTVRSLNGCRVADQILKLVPNVEHFRATLRCLKFWAKRRGVYSNVTGFL
GGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDALGFPVWDPRK
NPRDRFHHMPIITPAYPCMNSSYNVSTSTLRVMTEQFQSGNRICEEIELNKAQWSALFEP
YLFFEAYKNYLQVDIVAADAVDLLAWKGWVESRLRQLTLKIERDTDGMLQCHPYPNEYID
PSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQDINMYLPWKPGMDIYVSHVRR
RQLPGFVFPDGYKRSRPSRHVNQQTNRTSEDVARSQSGSAERHVKRKNDCEMADLKPVKP
EKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILGCSTIGDIVSNCEDVASNSEVRS
TSWQLESEKSDLGDARRLGVTVYQESPSNQQTSMDVHDSPIVRNELEPADHMNGSEPMGL
MFDRITKQELVSSHEVPNFETGEKHKEVGVNENIEDLGSNFLENGSSRKLMNWVGGASRG
MEVDQELVKPCSQTAVVEFAESVISSHSGSQNLNYEGNVCAVDAADSLLESGCLNVSGAE
YYCRTACQKN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctcagagtcctaacggaactgcggcgaagaggtacggaataatgaaacca
atctccgtcgcgggtcctactgaacctgatctccatcgaaatgcggaattagagaagttt
ttggttgattcgggtttatacgagagcaaagaagaggctatgaagagagaagaggttctg
ggccgtatcgatcagattgtgaaagactgggttaagcgattgacgcgtcaaaggggatat
actgatcagatggtagaggaggccaatgctgttatttttactttcgggtcttatcgtctt
ggggtgcatggtcctggggctgacatagacaccttgtgtgttggaccatcatatgtgaat
cgagagggagacttctttattgtcttgcatgataagctggctgagatggaagaagttact
gaacttcagccagttccagatgctcatgtcccggttatgaagtttaaattccagggaata
tcaattgaccttctttatgcaagtatatcccttttggttgttccagaagacctggacatc
tccaatgggtctgtgctctacgaggtggatgagcaaactgttcgaagtctaaatgggtgc
agggttgctgatcaaattcttaaacttgttccaaatgttgagcactttcgggcaacactc
agatgtctgaagttttgggctaaaaggcgcggtgtttattcaaatgttactggtttcctt
ggtggagtaaactgggctcttctagttgcccgagtgtgccagctttatcctaatgctatt
cctagtatgctagtctctcggttcttcagagtttatacacaatggcgttggccgaatcct
gtgatgctatgctcaatagaagaagatgcacttgggtttcctgtgtgggatccacgcaaa
aatcctcgagaccggtttcatcatatgccaataataactcctgcatatccttgcatgaat
tctagctataatgtgtctacaagtactcttcgtgttatgacagagcaattccaaagtggt
aacaggatatgtgaggagattgagctgaacaaggcacagtggagtgctctttttgagcct
tatcttttctttgaggcatacaaaaattacctgcaagttgacatagttgcagcagatgct
gttgatttgctagcttggaaaggctgggtagagtctcggcttagacaacttaccttgaag
atagagcgggacactgatgggatgctgcagtgccatccttatccaaatgagtatatagat
ccgtccaagcaatgcgcacattgtgctttcttcatgggtttgcagaggaaagagggagtg
actggccaggagggccagcaatttgatatacggggaacagttgatgagtttaggcaagat
ataaacatgtacttgccttggaaaccagggatggatatatatgtctctcatgttcgtaga
agacagcttccgggctttgttttccctgatgggtacaagcgttctcgaccatcacgacat
gtgaaccaacagactaacaggactagtgaagatgttgcaagatcccagtctgggtctgct
gagagacatgttaagcggaaaaatgattgtgaaatggcagatttgaagccagttaaacca
gagaaacgggcgtctacaagcccacaaagactgcagtctgtttctccttctagtagtgct
ggtaggtctggtatgacatctctggctagttcctgtgaaggggttatattagggtgttca
accattggggacattgttagcaactgcgaggatgttgctagcaactccgaggttaggtca
actagttggcagttagagagtgaaaaaagtgatttgggggatgctaggcggctgggtgtg
actgtctatcaggaatcaccctcaaatcagcagacctcaatggatgtacatgattcacca
atagttaggaatgagctagaaccagctgatcatatgaatggctcagagccaatgggattg
atgtttgatcgaattacaaagcaggagttggtcagttcacatgaagtgccaaattttgaa
actggggaaaaacataaggaggttggcgtgaatgaaaacattgaggatttggggtcaaat
ttcttggagaatggatcttcaaggaaactgatgaattgggttgggggtgctagtcgaggc
atggaggttgaccaagaacttgtcaaaccatgtagtcagacagctgttgtagaatttgct
gaaagtgttataagttcacattctggctctcagaacctcaactacgagggtaatgtgtgt
gctgtggatgcggcggattcacttctggaaagtggatgtttgaatgtgagtggagctgag
tattattgcagaacagcttgccagaagaattag
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