KEGG   Populus nigra (Lombardy poplar): 133689556
Entry
133689556         CDS       T10372                                 
Name
(RefSeq) elongation factor 1-alpha-like
  KO
K03231  elongation factor 1-alpha
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133689556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133689556
   03016 Transfer RNA biogenesis [BR:pnz03016]
    133689556
   03012 Translation factors [BR:pnz03012]
    133689556
   04131 Membrane trafficking [BR:pnz04131]
    133689556
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133689556
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     133689556
Transfer RNA biogenesis [BR:pnz03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    133689556
Translation factors [BR:pnz03012]
 Eukaryotic type
  Elongation factors
   133689556
Membrane trafficking [BR:pnz04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    133689556
Exosome [BR:pnz04147]
 Exosomal proteins
  Proteins found in most exosomes
   133689556
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 FcpA FlpD AAA_22 Gtr1_RagA
Other DBs
NCBI-GeneID: 133689556
NCBI-ProteinID: XP_061965436
LinkDB
Position
3:complement(16299722..16302498)
AA seq 447 aa
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQISEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAVKKK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgggcaaggagaaggttcacattaacattgtggttattggtcatgttgactctggcaag
tcaacaactactggtcatttgatctacaagcttggaggtatcgacaagcgtgtgattgag
aggtttgagaaggaagctgctgagatgaacaaaaggtcattcaagtatgcctgggttttg
gacaagcttaaggctgagcgagagcgtggtatcacaattgacattgctctctggaagttt
gagacaactaggtactactgcactgtcattgatgcccctggtcatcgtgactttatcaag
aatatgatcactggtacctcacaggctgactgtgctgtcctaattattgattccaccact
ggtggttttgaagctggtatctccaaggatggccagacccgtgaacatgccttgcttgcc
ttcacccttggtgtgaagcagatgatttgctgttgcaacaagatggatgccaccaccccc
aagtactccaagtctcggttcgatgaaatcgtgaaggaagtttcttcctacctgaagaag
gttggttacaaccctgagaagatcccatttgtccctatatctggttttgagggtgataac
atgattgagaggtccaccaaccttgactggtacaagggccccaccctccttgaagctctt
gaccagatcagcgagcccaagagacccacagacaagcctctccgtcttccacttcaggat
gtctacaagattggtggtattggaactgtacctgtgggacgtgttgagactggtgtcctg
aagcctggtatggtcgtgaccttcggccccactggactgactactgaagttaaatctgtt
gagatgcaccatgaagctcttcaggaggcccttccaggtgacaatgttggtttcaatgtt
aagaatgttgctgtcaaggatctcaaacgtggttttgttgcttccaactctaaggatgat
cctgccaaggaggctgccaacttcacctctcaggtcatcatcatgaaccaccctggtcaa
attgggaatggatatgcccctgtccttgactgtcacacctgccacattgctgtcaagttt
gctgagattttgaccaagattgacaggcgatctggcaaagagctcgagaaggagcccaag
ttcttgaagaatggtgatgctgggtttgtgaagatgattcccaccaagcctatggttgtt
gagaccttttctgcctatcctcctcttggtcgttttgcagtgagggacatgcgtcagacc
gtggcggttggtgtcattaagagtgttgagaagaaggatccatctggtgccaaggtcacc
aagtctgcagtaaagaaaaagtga

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