Populus nigra (Lombardy poplar): 133689556
Help
Entry
133689556 CDS
T10372
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133689556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133689556
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133689556
03012 Translation factors [BR:
pnz03012
]
133689556
04131 Membrane trafficking [BR:
pnz04131
]
133689556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133689556
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133689556
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133689556
Translation factors [BR:
pnz03012
]
Eukaryotic type
Elongation factors
133689556
Membrane trafficking [BR:
pnz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
133689556
Exosome [BR:
pnz04147
]
Exosomal proteins
Proteins found in most exosomes
133689556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FcpA
FlpD
AAA_22
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
133689556
NCBI-ProteinID:
XP_061965436
LinkDB
All DBs
Position
3:complement(16299722..16302498)
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKSRFDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQISEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSAYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAVKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggagaaggttcacattaacattgtggttattggtcatgttgactctggcaag
tcaacaactactggtcatttgatctacaagcttggaggtatcgacaagcgtgtgattgag
aggtttgagaaggaagctgctgagatgaacaaaaggtcattcaagtatgcctgggttttg
gacaagcttaaggctgagcgagagcgtggtatcacaattgacattgctctctggaagttt
gagacaactaggtactactgcactgtcattgatgcccctggtcatcgtgactttatcaag
aatatgatcactggtacctcacaggctgactgtgctgtcctaattattgattccaccact
ggtggttttgaagctggtatctccaaggatggccagacccgtgaacatgccttgcttgcc
ttcacccttggtgtgaagcagatgatttgctgttgcaacaagatggatgccaccaccccc
aagtactccaagtctcggttcgatgaaatcgtgaaggaagtttcttcctacctgaagaag
gttggttacaaccctgagaagatcccatttgtccctatatctggttttgagggtgataac
atgattgagaggtccaccaaccttgactggtacaagggccccaccctccttgaagctctt
gaccagatcagcgagcccaagagacccacagacaagcctctccgtcttccacttcaggat
gtctacaagattggtggtattggaactgtacctgtgggacgtgttgagactggtgtcctg
aagcctggtatggtcgtgaccttcggccccactggactgactactgaagttaaatctgtt
gagatgcaccatgaagctcttcaggaggcccttccaggtgacaatgttggtttcaatgtt
aagaatgttgctgtcaaggatctcaaacgtggttttgttgcttccaactctaaggatgat
cctgccaaggaggctgccaacttcacctctcaggtcatcatcatgaaccaccctggtcaa
attgggaatggatatgcccctgtccttgactgtcacacctgccacattgctgtcaagttt
gctgagattttgaccaagattgacaggcgatctggcaaagagctcgagaaggagcccaag
ttcttgaagaatggtgatgctgggtttgtgaagatgattcccaccaagcctatggttgtt
gagaccttttctgcctatcctcctcttggtcgttttgcagtgagggacatgcgtcagacc
gtggcggttggtgtcattaagagtgttgagaagaaggatccatctggtgccaaggtcacc
aagtctgcagtaaagaaaaagtga
DBGET
integrated database retrieval system