Populus nigra (Lombardy poplar): 133689596
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Entry
133689596 CDS
T10372
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133689596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133689596
Spliceosome [BR:
pnz03041
]
Common components
Common spliceosomal components
SR proteins
133689596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
133689596
NCBI-ProteinID:
XP_061965492
LinkDB
All DBs
Position
3:complement(5179439..5182567)
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AA seq
295 aa
AA seq
DB search
MPRYDDRYASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDA
RHYLDGKEFDGSRIIVEFAKGVPRGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWK
NKCYRCGERGHIERNCKNSPKKLTRGRSYSRSPGRSRSPHRGRSRSPSYSRGRSYSRSRS
PPPKRERSVENENRSLSPEPKSTKARKRSPTPDEGSPRPSPKSRKLDDEQDREYSGSPTG
RSRSRSRSRSPRDERYRSPQTNGRSRSPSPRDDRSPVDDDYEDNNRSPRDSDVSR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgatatgatgaccgatatgccagtacgcgtctctatgttggacacctggctgct
aggacacgatcacgggatctggaacatcttttcagcaaatatgggcgagtacgagatgtg
gatatgaagcgtgactatgcatttgttgaatttagtgatcccagagatgctgatgatgca
aggcattacttagatggcaaggagtttgatggaagtcgtatcattgtggaatttgcaaag
ggggtacctcgtggttctcgagaatatttgggcagaggtcctcctccaggatctggacgc
tgctttaattgtggcattgatggccactgggctcgagattgcaaagctggagactggaag
aacaagtgttatcgttgtggggaaagaggtcatatagagagaaactgcaagaacagtccc
aagaaactcacgcgggggaggagttactctcgatcaccaggtagatcacgctctcctcac
cgtggcagaagccgcagcccaagttatagccgaggtcgaagctacagccgatcaagatcc
ccaccaccaaagagagagcgaagtgttgagaatgagaacaggtcattgagccctgaacca
aagagtacaaaggccaggaagcgcagcccaacacctgatgaaggcagcccacgcccttct
cccaaatctcgaaaactggatgatgagcaagatagagagtacagtggcagccccacggga
agaagcagaagcagaagcagaagcagaagccctcgagatgagaggtatagaagtcctcag
actaatggtcgcagccgcagtcccagtcccagggatgatagaagccctgttgatgatgat
tatgaggacaacaaccgctccccgagagatagtgacgtgtcacgttga
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