KEGG   Populus nigra (Lombardy poplar): 133689610
Entry
133689610         CDS       T10372                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133689610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133689610
Spliceosome [BR:pnz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133689610
 Complex B
    133689610
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus PqqF-like_C_4 zf-CCCH_4
Other DBs
NCBI-GeneID: 133689610
NCBI-ProteinID: XP_061965517
LinkDB
Position
3:17886357..17889144
AA seq 311 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLLLSNMYQRPDMLTP
GVDPQAQSQSLDPRKIQDHFEDFYEDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE
EEHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR
ELRRQLFGRNRRRRSRSRSHSPDRHRGHEERPHGGRGLNRREDDREHYNERGRRPRSRSP
ARRGGRSSPGGRRNRSPVRESSAERRAKIEKWNREKEQTDSGGRGDSRNPENDRDNSDFA
ENGGHYDDAQH
NT seq 936 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcatccatattcgggacagagaaagacagggtgaactgtcctttt
tacttcaagatcggagcctgcagacatggtgatcgatgctcaagactccacacaaagccg
acaatcagcccaaccctgttgctctccaacatgtaccagagacctgacatgctcactcct
ggagtggatcctcaggctcaatcccagtccctcgatccccggaagatccaagaccacttt
gaggatttttatgaggatttgtttgaagaactcagcaagtatggtgatattgagagctta
aatatctgtgataatcttgctgaccacatggtgggtaatgtgtatgtccagtttagagaa
gaagagcacgctgctaatgcccttcgcaatcttaacggaaggttttatgcagggcgaccc
atcattgttgacttttctcctgtcacggatttccgtgaagctacatgtaggcaatatgag
gaaaatgtttgcaatcgaggtggctactgcaacttcatgcatcttaagaagattagcagg
gaattgaggaggcagttatttgggaggaacagacgaagacgtagccgcagtagaagccat
agtcctgataggcaccgtggtcatgaggagcgtccacatggtggccgtggtttgaatagg
agagaggatgacagggagcattacaatgaaaggggcaggaggcctagaagccgaagtcct
gcacgcaggggaggacgaagtagccctggggggaggagaaacaggagtcctgtcagagag
agtagtgctgaaagaagggctaagattgaaaagtggaacagggaaaaggaacagacagat
tctggtggtagaggtgatagcagaaaccctgaaaatgatagggataacagtgacttcgct
gagaatggtggccattatgatgatgcccagcactag

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