Populus nigra (Lombardy poplar): 133689653
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Entry
133689653 CDS
T10372
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133689653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133689653
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
133689653
Prokaryotic type
Archaeal type
TFB
133689653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
133689653
NCBI-ProteinID:
XP_061965591
LinkDB
All DBs
Position
3:23681208..23685735
Genome browser
AA seq
312 aa
AA seq
DB search
MGDAFCSDCKKHTEVVCDHSAGDTVCSECGLVLESHSIDETSEWRIFANESGDNDPVRVG
GPTNPLLTDGGLSTVIAKPNGASGDFLSTSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLEAGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF
DIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPAWY
ANEEDLKNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggggacgctttctgttcagattgtaagaaacacacggaggtagtatgcgaccattca
gcaggagacacagtgtgttcagagtgtggtcttgtcttagaatctcactcgatcgatgaa
acatcagagtggagaatctttgcgaatgaatcaggagataatgatccagttcgtgtcggt
ggacctactaatcctttgttaacagacggtggcctttctactgttattgctaaacctaat
ggtgcttccggagatttcttgtcgacttctcttggtcggtggcagaaccgtgggtccaat
cctgatcgtgggttgattctggcttttaaaaccattgcaaccatgtctgacaggttgggc
cttgttgcaacaatcaaggatcgggctaatgagatctataagaaggtggaggatcaaaag
tccagtagaggaaggaatcaggatgctttattggctgcttgcctctatattgcttgtcga
caagaagacaagccccgaaccgtaaaggaaatttgctctgtcgccaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactgggtttggaggcaggtcag
tctgtggagatgggaactatacatgctggggattttatgagacgtttctgttccaatctt
ggaatgtctaatcatacagttaaagctgccacagaagctgttaagacgtcagaacagttt
gatataaggaggagtcctatatcaatcgcagcagctgttatttatataataactcagctt
tcagacgacaagaagcctctccgagatatttcactagcaactggagttgctgaaggaaca
atcagaaattcgtacaaggatctctatccccacgtatcaaagataataccagcatggtat
gcgaatgaggaagatctgaagaaccttagcagtccttga
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