KEGG   Populus nigra (Lombardy poplar): 133689718
Entry
133689718         CDS       T10372                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133689718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133689718
   03041 Spliceosome [BR:pnz03041]
    133689718
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133689718
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133689718
Spliceosome [BR:pnz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133689718
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 BUD22
Other DBs
NCBI-GeneID: 133689718
NCBI-ProteinID: XP_061965700
LinkDB
Position
3:complement(25258296..25263368)
AA seq 472 aa
MARKRKLDSKSTETAEEPPKKQQQQEEPPKEEPQEEEVEEEEEEEYEEVEEEEEDNEDDP
DGETNQNAQISSVENLNDDDDEDEEPIEKLLEPFGKDQLINLLREAADGHRDVADKIRQV
ADQDPVHRKIFVHGLGWDTNAEALINAFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRS
GARKALKEPQKKIGNRMAACQLASTGPVPQSSAGPSGPIAAAAQTQQPVSEYTLRKIYVS
NVGANLDPQKLMSFFSEFGEIEEGPLGLDKATGKPKGFCLFVYKTVESAKKALEEPHKSF
EGHILHCQKAVDGPKHAKSQKPPQQHHNMQSSHYQRNDGGGYVASGGRGGHLMAPAAAGA
GIGFNQSAAAPALNPALGQALTALLATQGAGLGGLTNLLGTLGSAAAVSQGGVPSAVHGM
QGAYGNQASISPGVIGAYANQGAMQGGYPNQQMGQGGSGRGQHGQYTPYMGH
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggctagaaaacgaaagctcgactccaaatccacagaaacagcagaagaaccgccgaag
aaacaacagcaacaagaagaaccaccaaaggaagaacctcaagaagaagaagtagaagag
gaggaagaagaagaatatgaagaggtggaagaggaggaagaagataatgaagatgatcca
gatggagaaaccaatcaaaacgctcagatctcatctgttgagaatctaaacgacgacgat
gacgaagacgaggagccgattgagaaacttcttgaaccgtttggaaaagaccagttgatt
aatttacttcgtgaagcagcggatggtcaccgagatgttgcagataaaatccggcaagta
gctgaccaagatccggtgcaccggaagatttttgttcatgggcttggttgggatacgaat
gctgaggctttgatcaatgcgtttaagccttatggtgagattgaggactgtaaagctgtg
tgcgataaggttacggggaaatcgaagggttatgggtttattttgtttaagaaaaggagt
ggggcgcggaaggcgttgaaggagccgcagaagaagatagggaataggatggcggcttgt
caattggcttctactggtccggttccacagtccagtgctggaccctctgggccgatcgct
gctgctgcgcaaacacagcagccggtttcggagtatacgctgaggaagatttatgtgagt
aatgtgggagcaaatttggatcctcagaagctaatgagtttcttttcggagtttggagag
attgaagaaggaccattagggcttgataaagcgactgggaaaccgaaagggttttgtttg
tttgtttataagacagttgagagtgctaagaaagcgttagaagagccacataagagtttt
gaagggcacattttgcattgtcagaaagctgttgatgggccaaaacatgcgaaatcgcag
aaaccaccacagcaacatcataatatgcaaagctcgcattaccagaggaatgatggaggt
gggtatgttgctagtgggggtcgtggtggtcatttaatggccccggctgctgctggtgct
gggatcgggtttaatcagagtgctgctgctcctgctttgaaccctgcacttggacaggcg
ctgaccgcattgcttgccactcagggtgctggattgggagggctcactaatttgcttggg
actttggggtctgccgcggctgtgagccagggtggtgtacctagtgcagttcatggaatg
cagggtgcctatgggaaccaggcgagcataagtcctggagtgataggagcgtatgcgaat
cagggagctatgcagggtggatatccaaatcagcagatgggacagggtggttctgggaga
ggacaacatgggcaatataccccttatatgggtcactag

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