Populus nigra (Lombardy poplar): 133689748
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Entry
133689748 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133689748
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
133689748
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133689748
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133689748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133689748
NCBI-ProteinID:
XP_061965742
LinkDB
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Position
3:complement(19743838..19747368)
Genome browser
AA seq
498 aa
AA seq
DB search
MLIRLSKPSSETGGGGAAGGGGGSVVKPLTAETVTVACPDHLVLADLPVAKGIGSATAAT
VAKTVGRRSRRQIGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSICYLCDERIQK
IQTIKMMEGIFICAAPHCLKSFLKSSEFEAHIHDSHADLLQPNAVKDEGNEYEVQSTKQP
TASDSTVRAPPRPVISPGSSSQLLDFEDKARRQQPREPLQRPMMSKPPYFGQAQNYLSEP
QLNNNHPPGFDRPVQQSHFQQITQGHPQQESSQFADKQQGMVSETPMPEYPPMHSIQPPN
FVVPMNSNPLLTPQFGLPPFQTEGAQPFYVAPYEMGQMARPDSAPDGGAEQGSLLGFPPG
PASGMNFMANYSQPWNSGPAPGSQGIPDAFANSSDSQGNIAFYQGDYGRNPGILPMVPPP
PPTANKGMEAIHAGNMDHRDGKGILAPQPFKHPPPPPPPLPHASQSKRGKYYSGDMGHEG
PDFGWQHENRDGFGSGQE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcgacttagcaagccatcatcagaaactggtggcggcggtgctgctggtggt
ggaggagggtcggtcgtgaaacccttaacggcagaaacagtgacggttgcttgcccagac
caccttgtacttgctgatcttcccgtagcaaaaggcattgggagtgcaaccgctgctacc
gttgccaagactgtgggccgcagatcacggcgtcagattggcgagcgagtccatttttgc
gtccgctgtgatttcccaattgccatctacggtcgcctgagtccttgcgagcatgctttc
tgtcttgattgtgctaggagcgattcaatatgctatctttgtgatgaacgtattcagaag
attcagacaatcaaaatgatggaggggatcttcatctgtgcagctcctcattgtcttaaa
tctttcctgaagagttctgagttcgaagctcatattcatgatagccatgctgaccttcta
caaccaaatgcagtgaaagatgagggcaacgagtatgaagttcagagtactaaacaacca
acagcatcagattccactgttcgagctcctccaaggccagttatttcacctggttcaagt
tctcagcttcttgattttgaagacaaagctcgtcggcagcagcctagagaaccactacaa
aggccaatgatgtcaaaaccgccatattttgggcaagcccaaaattacctatcggagcct
cagctaaataataaccatcctccagggtttgaccgacctgtccaacagagtcattttcaa
cagatcacacagggtcatccacaacaagaatccagccagtttgcagacaagcaacaggga
atggtatctgagacccccatgcctgaatacccgcctatgcattccattcaaccaccaaac
tttgttgtgccaatgaattcgaatcctctattaactcctcaatttggtcttcctcctttc
caaactgagggagctcagccattctatgttgcaccctatgagatgggccagatggccagg
ccagattcagcaccagatggtggagcagaacaagggtctttgttgggcttcccaccaggc
ccagcaagtggtatgaatttcatggcaaattattctcagccctggaattctggaccagca
ccagggagccagggaattcctgatgcttttgcaaactcgtcagattctcagggaaatatt
gcattttatcaaggagactatggacgaaatccaggaattctaccaatggtccctcctccc
ccacccactgccaacaaggggatggaagctatacatgctggtaatatggatcatcgagat
ggcaaaggtatattggcaccacagccctttaaacatccaccaccacctccgcctcccttg
cctcatgcatcacagtccaaacggggtaaatattattctggggatatgggccatgaggga
cctgattttggatggcagcatgagaaccgtgatggttttggaagtgggcaggagtag
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