Populus nigra (Lombardy poplar): 133689766
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Entry
133689766 CDS
T10372
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133689766
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133689766
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
133689766
NCBI-ProteinID:
XP_061965771
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Position
3:367537..371853
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AA seq
458 aa
AA seq
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MDLTATTTLNSDPKEANAVNKQAETGMDAATEGGQQQGQPKGSEKWPGWPGDNVFRLIVP
VSKVGSIIGRRGELVKKMCDETLARIRILEGPLGISDRIVLISGKEEPEAPQSPAMDAVM
RVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKSIQENTGA
AVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLVDHSVIPIFEKTYNA
TISQECPADARPDIAQPSLHSAYVPTIPSGIASDYSLSLKRDPSIYEHETQFEHKISQPG
LSIYGQDSGIVGFRSTGLGRATAPIVTQVTQTMQVPLSYAEDIIGVAGSNIAYIRRTSRA
ILSIQESRGLPDEITVEIKGTGAQVQMAQQLIQEFITNHKEPASSMYGKIDAGLSAYSHM
AETGYPSSSFTSHLGGYGSSSMGGYGSPGAGGYNNYRF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggacttaacagccacaacaacgctcaattcagatccaaaagaagcaaacgccgttaac
aaacaagcagaaacgggaatggatgcagcgacggagggaggacagcaacagggacaacca
aaaggatcagagaagtggccgggatggccaggagataatgtgtttaggttaatagtgccg
gtatcgaaagtaggaagtataattggacggagaggagagttggtgaagaagatgtgtgat
gaaacccttgctcgcattcgtattcttgaaggtccccttggtatttctgatcgaattgtt
ctgatttctggtaaagaagagccagaagctccacaatctcctgcaatggatgctgtaatg
agagtgttcaagcgtgtgagtggtctatcacctggtgagggtgacaacactggttcagct
gctgctgctgctggctctgcattttgttccataaggttactggttgcatcttcacaggca
ataaacttaattgggaagcaaggatccataatcaaatcaatacaggaaaacactggtgca
gctgtgcatgttatggcagaagatgagttaccttcatatgctacttcagatgagagaatt
gtggaaatacatggtgaagctatgaaggtttttaaagcattagaagcagtaataggacag
ctaaggaagtttttggttgatcatagtgtcattcctatatttgagaaaacttacaatgca
acaatttcacaggaatgccctgcagatgcacggcctgatattgctcagccctcactacat
tctgcttatgttcccacaattccaagtgggattgcttctgattattccctatctttgaag
cgggatccgtcaatctatgaacatgaaacacaatttgaacacaaaatctcacaacctgga
ttgtcaatttatggacaagattctggaattgtagggttccgttcaactggacttggtcgc
gctactgctcctattgtaactcaggtgacacagacaatgcaagtacctctgtcatatgct
gaggatatcattggtgttgctggatctaatattgcctacattcgccgtaccagcagggca
atcctttcaatacaagagagcagaggattgcctgatgagatcactgtggaaattaagggc
accggtgctcaagttcagatggctcaacagcttattcaggagttcattactaatcacaag
gaaccagcgtcaagcatgtatgggaagatagatgcgggattaagtgcatattcacatatg
gcagaaaccggctacccttcatcttcgtttacatcacatctaggagggtatggatcctca
agtatgggagggtatggatcgcctggtgcaggaggttacaacaattatagattttga
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