Populus nigra (Lombardy poplar): 133689805
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Entry
133689805 CDS
T10372
Name
(RefSeq) ABC transporter B family member 1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133689805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133689805
04147 Exosome [BR:
pnz04147
]
133689805
04090 CD molecules [BR:
pnz04090
]
133689805
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133689805
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133689805
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133689805
CD molecules [BR:
pnz04090
]
Proteins
133689805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
AAA_29
RsgA_GTPase
AAA_30
AAA_15
nSTAND1
AAA_5
AAA_25
DUF87
APS_kinase
Rad17
Motif
Other DBs
NCBI-GeneID:
133689805
NCBI-ProteinID:
XP_061965841
LinkDB
All DBs
Position
3:complement(17092605..17099643)
Genome browser
AA seq
1357 aa
AA seq
DB search
MSQESLEIKTIEQWKWSEMQGLELVSEPPPDPSSHSHPFKTTPTRTLNTNSTYQQQESVV
ERREMESTEPKKDGTSSNSGGGGNGEKPGDVAVAGFGELFRFADGLDYVLMGIGSMGAFV
HGCSLPLFLRFFADLVNSFGSNANNMDKMMQEVLKYAFYFLIVGAAIWASSWAEISCWMW
TGERQSTRMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYM
ATFVSGFVVGFTAVWQLALVTLAVVPLIAVIGAIHTTTLAKLSGKSQEALSQAGNIVEQT
IVQIRVVLAFVGESRALQAYSSALKVSQRIGYKSGFSKGMGLGATYFVVFCCYALLLWYG
GYLVRHHYTNGGLAIATMFAVMIGGLGIGQAIPSMGAFAKAKVAAAKIFRIIDHKPAIDR
NSESGLELESVTGLVALKNIDFAYPSRPDARILNNFSLNVPAGKTIALVGSSGSGKSTVV
SLIERFYDPNSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADQ
VEIEEAARVANAHSFIIKLPDGFDTQVGERGLQLSGGQKQRVAIARAMLKNPAILLLDEA
TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEVGTHDELIA
KGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLS
DFSTSDFSLSLDAPFPNYRLEKLAFKEQASSFWRLAKMNSPEWVYALVGSIGSVICGSLS
AFFAYVLSAVLSVYYNPNHDYMSREIAKYCYLLIGLSSAALIFNTLQHSFWDIVGENLTK
RVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVA
CTAGFVLQWRLALVLIAVFPLVVAATVLQKMFMNGFSGDLEAAHSKATQLAGEAIANMRT
VAAFNSEAKIVGLFSTNLETPLRRCFWKGQIAGSGFGIAQFSLYASYALGLWYASWLVKH
GISNFSNTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDAT
PVPDRLRGEVELKHVDFSYPTRPDIPVFRDLNLRARAGKILALVGPSGCGKSSVIALIQR
FYEPSSGRVMIDGKDIRKYNLKSLRKHIAIVPQEPCLFGTTIYENIAYGNESATEAEIIE
AATLANAHKFVSALPDGYKTFVGERGVQLSGGQKQRIAIARALIRKAGLMLLDEATSALD
AESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDG
SYARMIQLQRFTHSEVIGMTSGSSSSTRPKDDDEREG
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagagtctctagagataaagacgattgaacaatggaaatggtcagaaatgcaa
ggccttgaactcgtgtccgagcctcctcctgatccctcctctcactcccatccctttaaa
accacaccaactcgaacattaaacacaaactccacataccaacaacaagaaagtgtagtt
gagagaagagaaatggaaagtacagagccaaagaaagatgggacttctagtaacagtggt
ggtggaggtaacggagagaagccgggtgatgtggctgtagctgggtttggagagctgttt
agatttgctgatgggttagattatgtgttgatgggaattgggtcaatgggtgcatttgta
catggatgttcgttacctctctttcttcggttctttgccgatcttgttaactcttttggt
tctaatgccaataacatggataagatgatgcaagaagttttgaagtacgcattttacttt
cttattgttggtgctgcaatttgggcatcatcatgggcagaaatatcatgttggatgtgg
actggagagaggcaatcaacaaggatgaggatcaagtacctagaagcggcattaaaccag
gacattcaatacttcgacaccgaagttcggacatcagacgttgtttttgccatcaacact
gatgcagtgatggtccaagatgctatcagtgagaagttgggtaattttattcactacatg
gcaacatttgtttctggatttgtggtgggttttactgctgtgtggcaattagcactggtc
actctggcagtggttccactcatagctgtaattggagccatccacaccaccacattagcc
aagctctctggcaaaagccaagaagctttatcacaggctggaaacattgttgagcagacg
attgtccaaatccgggttgttttggcatttgttggggaatcaagagcattacaagcctac
tcgtcagctttgaaggtttctcaaaggattggttacaagagtggattttcaaagggaatg
ggattaggtgcaacttactttgttgttttctgttgctatgctcttcttctctggtatgga
ggttatcttgttagacaccattataccaatggaggtctagccatagctaccatgtttgct
gttatgattggaggattaggtataggacaagctatccctagcatgggtgcatttgccaaa
gcaaaagttgcagctgcaaaaattttccgaataatcgatcataagccggctattgaccga
aacagtgaatctgggctggaattagaatcagttactgggcttgtagcgctcaaaaatata
gattttgcgtacccttcaagaccagatgctcgaattctgaacaatttttcgcttaatgtc
ccagctggaaagaccatagctttggttggcagcagtggctctggtaaaagcactgtagtc
tcgctcattgagagattctatgatcccaactcaggacaagtactgctagatgggcatgac
attaagacattaaagctgagatggctgagacaacaaatagggctagttagccaagagcct
gccttgtttgcaacaaccatcaaggaaaatatactattgggaaggcctgatgcagatcaa
gttgaaatagaagaagctgccagggttgcaaatgcccattcgttcattatcaagctaccc
gatggctttgacactcaggtgggtgagagaggactgcagctttctggaggacagaagcag
agagtagctatagcaagggctatgctgaaaaacccagcaattttgctcttagatgaggca
acgagtgctttagattccgagtcagaaaagctagtgcaagaagcccttgacaggtttatg
attggcaggactactcttgtcattgcccatcggctctccaccatacgcaaggctgacctt
gtagctgtactccagcaaggtagtgttagtgaagtaggaacacatgatgagctcattgca
aaaggagaaaatggtgtgtatgccaagctcattagaatgcaggaggcagcacatgaaaca
gctctaaacaatgccagaaagagtagtgcaaggccttctagtgcaaggaactcagtaagc
tcaccaataattgcccgtaattcatcatatggccgatcaccatactcacgcaggctatct
gacttttctacctccgattttagtctctcccttgatgccccattccccaattaccgactt
gaaaaacttgctttcaaggagcaagctagttccttttggcgccttgcaaagatgaattct
cctgaatgggtctatgccttggttggttctattgggtctgttatttgtggttcccttagc
gccttttttgcatatgttctcagtgctgtacttagcgtctactataatccaaaccatgat
tatatgagcagagaaattgcaaaatactgctatttgctaatcgggctctcatcagctgca
ctgatattcaatacactacagcattccttctgggatattgtgggagaaaaccttacaaaa
cgagtgagggagaaaatgctgacagcagtgctaaaaaatgaaatggcatggtttgatcag
gaggaaaatgagagtgctaggattgcagcaagattggctcttgatgcaaacaacgtcaga
tcagccattggggacagaatttcagtgattgtacagaatacagcactcatgctagttgct
tgcactgcagggtttgttttgcagtggcgccttgcccttgttctcattgctgtcttccct
ttggttgttgcagccactgttctacagaaaatgttcatgaatggtttctcgggagaccta
gaagctgcccattccaaggccacacaactggcaggagaggccatagccaatatgaggact
gttgctgccttcaattctgaggcaaaaatagtgggtcttttctctaccaatctcgaaact
cctttacggagatgcttttggaagggacagattgcaggaagtggatttgggattgcacag
ttttctctttatgcttcttatgctctgggtctttggtatgcatcctggctagtgaagcat
ggaatctccaatttctcaaacacaatccgagtttttatggtcctcatggtctctgccaat
ggtgcagctgaaacattaaccttggctcctgacttcattaagggtggtcgagccatgcgc
tcagtctttgacctgcttgaccgcaaaactgaaattgaacctgatgatcctgatgccacc
cctgttcctgatcgtcttcgtggagaagttgagctaaagcatgtagacttttcttatccc
actcgccctgacattccagttttccgcgacctcaatcttcgtgcacgagctggcaaaatt
cttgcccttgtgggtcctagtggatgtggtaagagctctgtcattgctctcatacagaga
ttctatgagccatcatctgggcgggtgatgattgatggaaaggacattaggaaatacaat
ctcaagtccctgagaaagcacattgcaatagtcccccaggagccatgcctctttggtact
accatttatgaaaatattgcatacgggaatgagtcagcaacagaggctgaaataattgaa
gccgctactttggccaatgcccataagttcgtatctgcattaccagatgggtacaaaaca
tttgtaggggagaggggagttcagttatctggtggacagaagcagagaattgccattgct
cgagctttaataaggaaggctgggcttatgctactcgatgaggcaacaagtgcactagat
gctgagtctgagaggtctgtccaggaagccctggatcgtgcctgctcaggaaagaccaca
attgttgttgcacaccggctatcaaccataagaaatgctcatgtcattgctgtaattgat
gatggtaaagtagcagagcaaggatcccactcgcatcttttgaaaaattatcctgatggg
agctatgcccgcatgatacagttacaaaggttcacacatagcgaagtcattggaatgacc
tcaggttcaagttcctcaactagacctaaagatgatgatgagagggaaggctag
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integrated database retrieval system
