Populus nigra (Lombardy poplar): 133689846
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Entry
133689846 CDS
T10372
Name
(RefSeq) biotin carboxylase 1, chloroplastic
KO
K01961
acetyl-CoA carboxylase, biotin carboxylase subunit [EC:
6.4.1.2
6.3.4.14
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00061
Fatty acid biosynthesis
pnz00620
Pyruvate metabolism
pnz00640
Propanoate metabolism
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
pnz01200
Carbon metabolism
pnz01212
Fatty acid metabolism
Module
pnz_M00082
Fatty acid biosynthesis, initiation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
133689846
00640 Propanoate metabolism
133689846
09103 Lipid metabolism
00061 Fatty acid biosynthesis
133689846
Enzymes [BR:
pnz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
133689846
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
133689846
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Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
ATP-grasp
Dala_Dala_lig_C
RimK
ATP-grasp_LDMS
ATP-grasp_5
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-GeneID:
133689846
NCBI-ProteinID:
XP_061965898
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Position
3:complement(21131200..21140382)
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AA seq
529 aa
AA seq
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MEATLPVCKSVTSTPGLFMGKTSGIRSSQCSFMMGNKVNFPKQRAQTAHVSHCAKNGGAL
GVTCRAEKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDKDALHVKLADESVCIGEAPS
SQSYLVIPNVLSAAISRRCTMLHPGYGFLAENAVFVEMCREHGINFIGPNPDSIRVMGDK
STARETMKKAGVPTVPGSDGLLQSTEEGVRLANEIGYPVMIKATAGGGGRGMRLAKEPDE
FVKLLQQAKSEAAAAFGNDGVYLEKYVQNPRHIEFQVLADKFGNAVHFGERDCSIQRRNQ
KLLEEAPSPALTPELRKAMGDAAVSAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQVE
HPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRIT
AYLPSGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDDTIITGVP
TTIDYHKLILEIEDFKNGNVDTAFIPKHEKELAAPQQIIPAKQFTNSAA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggaggctacgttgcctgtttgcaaatctgttacctctactcctggtttattcatgggg
aaaactagtggaatcaggagttcgcaatgcagctttatgatgggaaataaggttaacttt
cctaaacaaagagctcagactgcccacgttagtcactgtgctaagaatggaggagctctt
ggggttacatgtcgcgcggaaaaaattctggtagcaaatagaggagagattgctgttcgt
gttattcgaactgcacatgagatggggataccatgtgtagctgtttactctaccatagac
aaggatgcacttcatgtgaaattggctgacgaatcagtgtgcatcggtgaagcacccagc
agtcagtcgtacttagtgatcccaaatgttttatctgctgctataagtcgtagatgtaca
atgctgcatcctggatatggcttccttgctgaaaatgctgtatttgtggaaatgtgcaga
gaacatggcataaactttattgggcctaatcctgacagtataagggtcatgggtgacaaa
tcaactgctagagaaacaatgaagaaggcaggggttccaactgtaccaggaagtgatggc
ttattacagagtactgaggaaggagtaaggctcgccaacgagattggttatcctgtgatg
atcaaggcaacggcaggtggtggaggacgtggaatgcggctcgccaaagaacctgatgag
tttgtgaagttgctacagcaagctaaaagtgaggctgctgctgcatttggaaatgatgga
gtttatttggagaagtatgttcaaaatcccagacacattgaattccaggttcttgcagac
aaattcggtaatgctgttcattttggtgagcgagactgcagtattcagagacgtaaccaa
aagctgttggaagaagcaccatctccagctttgactcctgagttacggaaggccatgggt
gatgcagcagtttcagctgcagcatccatagggtacattggtgttggaacggttgagttc
cttttggatgaaaggggttccttctacttcatggaaatgaacactcgaatccaggtggag
catccagtgactgaaatgatttcttctgttgatttgattgaggaacaaattcgtgtagcc
atgggagagaaacttcgatacaaacaggaagatattgttcttagaggacattcaattgaa
tgccgtatcaatgcagaagatgcttttaagggattccgacctgggcctgggagaataaca
gcatatttgccatctggaggcccgtttgttagaatggatagccatgtttatcctgattat
gttgttcctccaagctatgattccctacttggaaagcttattgtctgggctccaacaaga
gaaaaggcaattgagcgaatgaaaagggctcttgatgacactattattactggagttccg
acgactatagattaccacaaacttatccttgaaattgaggacttcaaaaatggaaatgtt
gataccgctttcattccaaagcatgaaaaggagttggcagcgccacaacaaatcatacca
gccaaacagtttaccaattcagccgcataa
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