Populus nigra (Lombardy poplar): 133689866
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Entry
133689866 CDS
T10372
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133689866
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133689866
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-met
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
133689866
NCBI-ProteinID:
XP_061965925
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Position
3:16508548..16511131
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AA seq
512 aa
AA seq
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MMSGDAFSLPSSIAGFAQDQNNANPNPNPKTNPNQAAKRKRNLPGTPDPDAEVIALSPKS
LMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKKVYICPEKTCVHHDP
SRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGTLFSR
KDSFITHRAFCDALAEESARITSVPAAANLNFRNDTVDLPHGFPDRPGVPDIAGIPQFNS
GFGPDFSGMTPGNSLGVDQQKPGLSLWLNQANSHISPNLNLYVPSSSSGLPEMVQMGSAN
LYGSSSTANFGNLTLSGLPHGLKEEGSSKANMVNTSASLYSDSIQNKQSKPAAVPNMSAT
ALLQKAAQMGSTRSNQSFFGNNYGLMSCSSSSPTTNPISLNQNPNELHQVFQNVKQTAAE
SLTTTNSTVAMSDAMMGTSSNLDQLMMQTSGKLQNDQTQLKHQRGSNSIESGLTRDFLGM
SSESSRPFLPQDLAKFASISSAMSLNHFTVNP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtgatgctttctcactaccatcttcaatagcagggtttgctcaagaccag
aataatgcaaaccctaaccctaaccctaaaactaatcctaatcaagcggccaagaggaaa
agaaatttaccaggaacaccagatccagatgctgaggttattgctttatctccgaagtct
ctcatggctacaaaccggtttatatgtgaaatatgcaacaaaggatttcaaagagaccaa
aacttgcaacttcatcgaagaggtcacaatcttccatggaagctaaagcaaagaaccaac
aaagaggtacgaaagaaggtctatatttgcccagaaaagacctgcgttcaccacgatcca
tctagagctctcggagacttaactggcataaagaagcactttagcagaaaacatggggag
aagaagtggaagtgtgagaaatgttcaaagaagtatgcagttcaatcagactggaaagct
cactccaagacttgcgggactagagagtataaatgtgactgtgggactttattttccagg
aaagatagctttatcacacacagagccttttgcgatgccttagctgaagaaagtgcaaga
atcacttccgttccagctgcagcaaatctaaatttcagaaatgatacggtagatttgcct
catggatttcctgaccggccgggagttccagatatcgcaggcattccacaattcaattca
ggttttggacctgatttcagtggcatgactccaggaaattctcttggtgttgatcaacaa
aagcctggactttctctgtggctaaatcaagccaattcacatattagtcccaatttaaat
ctttacgtgccatcgagttctagtggtttgcctgaaatggtgcaaatgggatcagccaat
ctctatggttcatcgtccaccgccaattttgggaatttaaccttatctggactccctcat
gggctaaaggaagaaggtagtagtaaagccaatatggtgaatacatcagcttctttgtat
tctgatagtattcagaacaagcaatcaaagccagctgcagtgcccaatatgtctgccact
gcacttctacaaaaggcagctcaaatgggttctacaagaagcaaccaatctttctttgga
aacaattatggactaatgagctgttcttcttcttctcctacaacaaaccccatctctctc
aatcaaaatccaaacgagctacaccaagtctttcaaaatgttaagcaaactgcagccgag
agcctaacaacaacaaatagtactgtagcaatgagtgatgcaatgatgggtacatcaagc
aaccttgatcaacttatgatgcaaacaagtggaaaactacaaaatgaccagactcagttg
aagcatcaaagaggttcaaattctatcgagagtggtttaacaagagattttctgggtatg
agtagtgaatccagtcgtccatttttaccacaagacctagcgaagtttgcttcaataagt
tcagccatgagcttgaaccatttcactgtcaatccttga
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