Populus nigra (Lombardy poplar): 133689957
Help
Entry
133689957 CDS
T10372
Name
(RefSeq) alpha-L-arabinofuranosidase 1-like
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00520
Amino sugar and nucleotide sugar metabolism
pnz01100
Metabolic pathways
Brite
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
133689957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133689957
NCBI-ProteinID:
XP_061966060
LinkDB
All DBs
Position
3:complement(25155068..25163121)
Genome browser
AA seq
670 aa
AA seq
DB search
MGYWKASCSVLLVCFFAGLCSVYQCSAAEVDAYQTAKLIVNASSGRPIPETLFGIFFEEI
NHAGAGGIWAELVSNRGFEAGGQNTPSNIAPWSIIGDQSSLTVSTDRSSCFERNKVALRM
HVLCDSEGSNICPAGGVGIYNPGFWGMNIEQGKIYKVVLYVRSLGSINVSVSLTSSDGLQ
ILATANIVDSDVSNWTKTEVLLEAKGTNPNSRLQLTTSRKGVIWFDQVSAMPLDTYKGHG
FQKELIEMLEDIKPQFIRFPGGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDD
GLGYFEFLQLSEDLGARPIWVFNNGISHRDEVDTTTVSPFVQEALDGLEFARGASDSKWG
SVRAAMGHPEPFDLKYVAVGNEDCWKKNYRGNYLKFYDAIKSAYPDIKIISNCDGSSHSL
DHPADYYDFHIYTSASHLFSMTHQFDHTSRSGPKAFVSEYAVTGKDAGTGSLLAALAEAG
FLIGLEKNSDIVEMASYAPLFVNDNDRRWNPDAIVFNSSMHYGTPSYWVQKFFRESSGAT
LLDAKLQTNSSSLVASAITWTNSVDGETYLKIKIVNFGNRHVSLKVSVDGLGLNSQLSGS
TKTVLTSSNVMDENSFTDPNKVVPDLSLLENADKDMNMIIAPYSLTSLDLLTESNNIRMP
QTDSSARSSI
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgggttattggaaggcctcctgcagtgttcttctggtctgcttctttgctggtctttgt
tccgtgtatcaatgctctgctgctgaagttgatgcatatcagacagcaaaattgatcgtt
aatgcctccagtggtcggcctattcctgaaacactctttggaattttcttcgaggagata
aaccatgccggagctggtgggatatgggcagagcttgtaagcaatcggggttttgaagct
gggggccaaaatactccctcaaatattgctccctggtctataattggtgatcagtcatct
ttaactgtatctactgatcgttcttcttgctttgagcgcaataaggttgcactccgaatg
catgtgctctgtgacagcgagggcagtaatatttgcccagctggcggagttggaatatat
aatccagggttttggggcatgaatattgaacaagggaagatctacaaagtagttctttat
gttcgttctcttggatcaatcaatgtatctgtatcattgacgagctcagatgggctgcag
atattggcaactgctaacattgtagattctgatgtttcaaactggacaaagaccgaggtt
ctattggaagccaaaggaacaaatcctaattcaaggcttcagttgacaacatccaggaaa
ggtgtaatatggtttgatcaagtgtcagctatgcctttggacacatacaaggggcatggt
ttccaaaaggagctcattgaaatgcttgaagatataaaaccccaatttatcagatttcct
ggtggatgcttcgttgaaggtgaatggttgagaaatgcatttcgctggaaggaaagcatt
ggaccctgggaggagagacctgggcattttggtgatgtttggatgtattggactgatgat
ggacttggttactttgagtttcttcaactatctgaagatcttggtgcacggcctatatgg
gtgttcaacaatggaatcagccatcgggatgaagttgataccaccactgtctcacctttt
gtacaagaagcccttgatggtcttgagtttgctagaggcgcttctgattctaaatggggt
tctgtaagagcagcaatggggcatccagagccgtttgacttgaaatatgttgctgttggg
aacgaggactgttggaagaagaattaccgaggaaattatctcaagttctacgatgctata
aaaagtgcctatcccgacatcaaaataatctcaaactgtgatgggtcttctcattctttg
gatcatcctgctgattactatgattttcatatttatacatctgccagccacctgttttct
atgactcatcaatttgatcacacatcccgctctggtccaaaggcttttgtgagtgagtat
gctgtgactggaaaagatgctggcacaggaagtcttttagcagcacttgctgaagctgga
ttcctcattgggctggaaaagaacagtgatattgtggagatggcaagctacgcaccactt
ttcgtgaatgacaatgataggaggtggaatccagatgcaattgtcttcaactcctcaatg
cactatggaactccaagctactgggtgcagaaattcttcagagagtcgagtggagcaact
ctgcttgatgctaaactacaaacaaattcctcttcacttgttgcatctgcaattacctgg
acaaactcagtggatggtgaaacttacctgaaaataaagattgtgaattttgggaacagg
cacgtgagtctcaaagtttcagttgatggattggggctcaactcacaattgtctggatca
acaaaaactgtgctcacttcttcgaatgtaatggacgagaattccttcacggatccaaac
aaggtggtgccagacctcagcctgcttgagaatgctgacaaagacatgaacatgataatc
gctccatattctttgacttcacttgatttattaacagaatcaaacaatatcaggatgcca
caaaccgattcttcggctagatcatcaatttag
DBGET
integrated database retrieval system