Populus nigra (Lombardy poplar): 133690001
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Entry
133690001 CDS
T10372
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133690001
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133690001
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133690001
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133690001
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133690001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
HNH_5
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
133690001
NCBI-ProteinID:
XP_061966116
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All DBs
Position
3:complement(906925..913377)
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AA seq
633 aa
AA seq
DB search
MHVGGITVDLNWLLQFIFTVFVIGLGLLHLVKNTASKYFEVGANFEAAESSHTAIDPNII
NQAVEAEEDSSICGHCGGFGSKKCSRCKSVRYCSHRCQEADWKAGHKLKCKDFKLNSSQT
VRSNFGFKPSGGGSRSFSNAALVPANGVSNSKPIKKPGKVLFPYDEFIKLYNSDKPEFSP
CGLLNCGNSCFANVVLQCLTYTRPLVAYLLKKGHQTECRHNDWCFLCEFQSHVERASQST
HPFSPINIISRLPNIGGNLGYGRQEDAHEFMRLAIDTMQSVCLDEFGGEKAVEPASQETT
IIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAASLEECLDQFTDKEWLHGEN
MYKCDRCNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFPEMLDLSPYMSEG
GDGTDVYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDCKVSSVELDEVLSQGAY
MLVYSRVSVRPSCLRTIEPSKEQQSIVKVELDSCTENPVEHLSPIESMDATNSGFPAPEN
ENYEVGSEHHESGTGNEDPDEMIGVDYCSSLSIPVGVSGLKKDSAAALDSEAVVIEHSLD
YTDTVMSESDSAVAKDIKVNGSIYSFSSEEIST
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcggtggaataacagtggatctgaattggttactacaatttatattcactgtt
tttgttattggtttggggttgttacacctcgttaagaatacggcgtccaagtacttcgaa
gtcggcgctaatttcgaagcagctgagagtagccacactgctattgatccaaatattatt
aatcaagccgtggaagctgaagaggactctagtatctgtggacattgtggcggttttggg
agtaaaaagtgttctcgttgcaaatccgtgagatattgctcacacagatgccaagaagca
gactggaaggctggccataagttaaaatgcaaggatttcaaattaaattcttcacaaaca
gtaagatcaaactttggttttaaaccttcaggtggtgggagtagaagcttttctaacgct
gcacttgttcctgccaatggagtttctaactctaagcctataaagaagccaggaaaggtt
cttttcccgtatgatgagttcattaaactttacaactcagacaagcccgaattctctccc
tgtgggctcttaaattgtggaaacagttgctttgccaacgtggttctacaatgcctcaca
tacacaaggccacttgttgcatatttgttgaagaaaggtcatcaaacagaatgtagacat
aatgattggtgttttctttgtgaattccaatcccatgttgaaagagcaagccaaagcaca
catcccttttcaccaataaatattatttctcggttacctaatattggtggtaatcttggc
tatggaagacaggaggatgcacatgagttcatgaggcttgctattgatactatgcaatca
gtatgccttgatgaatttggtggagaaaaggctgttgaacctgcctctcaagagactaca
ataattcaacacatatttgggggtcgcctccaatctcaggtgatatgcacaaaatgcaat
aagatttcaaatcagtttgagaacatgatggatttaactgttgagattcatggtgatgct
gcatccttggaggaatgcctcgatcaattcacagacaaagagtggcttcatggagaaaat
atgtacaaatgtgacaggtgcaatgactatgtcaaggcatggaagcgtcttaccattcaa
cgagctccaaatgttcttacaatcgctttaaagagattccagagtgggaggtttggtaaa
cttaacaaaagggtaacttttcctgagatgttagatctgagcccctacatgagtgaagga
ggagatggcactgatgtgtacaagctttatgcagttgttgtccatgtggatatgctaaat
gcatcattttttggtcattacatctgctacaccaaggatttccatggaaactggcacaga
attgatgactgcaaggtttctagtgttgaattagacgaggtactttctcagggtgcatat
atgcttgtgtacagcagggtttctgttcggccgtcatgtctcagaaccattgagccttca
aaggagcagcaatcaatcgtgaaagtagaactagattcttgcacggagaacccagttgaa
cacctttcaccaatagagtcgatggatgccacaaattctgggttcccagcacctgaaaat
gaaaattatgaagttggaagtgaacatcacgagtcagggactggtaatgaagatcctgac
gaaatgattggagttgattactgctcaagtttatccattccagtgggggtttctggcctc
aagaaagattccgctgctgcacttgattcagaagctgttgtgatagagcactccttggac
tatacagatacagtcatgtctgaatcagattctgccgttgcgaaggatatcaaagtaaat
ggcagtatttattcattctcgagtgaagagatttcaacataa
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