Populus nigra (Lombardy poplar): 133690137
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Entry
133690137 CDS
T10372
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133690137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133690137
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
133690137
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
Prok-RING_4
zf-RING_6
zf-RING_10
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133690137
NCBI-ProteinID:
XP_061966324
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Position
3:complement(4598370..4602336)
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AA seq
404 aa
AA seq
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MGMRRHGQSSGSSNDPGPSGESGRTTSSTTTASNEPRRFPLAAQPEIMRAAEKDDQYASF
IYDACRDAIRHLFGTRVAVAYQNETKLLGQMLYYVLTTGSGQQTLGEEYCDVTQVAGPHG
LAPTPARRALFIVYQTAVPYIAERISSRVASRAIALDDSLSDEPYRDIASGTSQAQSPII
IELPSSSSSGTSVSVLSRLRQKFNGIWTQAIQRWPTVLPVAREFLQLVLRTNLMFFYFEG
MYYHISKRASGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHQ
TSLVSHQTAGRGLPVLNEEGNLIPLEAGSGNWVSDSTSTSESNAISSSKCTLCLSNRQYP
TATACGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCLYHSDF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgagaaggcacgggcaatcctccggttcgagcaatgaccctgggcccagtgga
gaatccggtcggactacttcctcgaccaccacagctagcaacgaaccacggcggtttccg
ctagctgctcagccagaaataatgagagccgccgagaaagatgaccagtacgcttccttt
atttacgacgcttgccgcgacgccattcgtcacctctttggtacaagagttgctgtagct
taccagaatgagacaaagcttttagggcaaatgctatattatgtgttgacaacaggttca
ggacagcaaacccttggtgaagagtattgtgacgttactcaggttgcagggccgcatgga
cttgctccaacaccagcgaggcgtgctcttttcattgtatatcagacggctgttccttat
attgcagaaagaattagttcaagagttgcgtcccgtgccattgcacttgatgattctctg
tctgatgagccttatagagacattgcttcagggaccagtcaagctcaatcccccataata
attgaattaccgtcttcatcttcttctgggacatctgtttctgtactatcaaggttgagg
cagaaatttaatggaatatggacgcaagcaattcaaagatggcctacggtacttcctgta
gctcgtgaatttctgcaattggttcttcgcacaaaccttatgttcttctactttgaaggc
atgtattatcatatatccaaacgtgcatctggtatacgttatgtatttattgggaaacca
tccaatcaaaggcctagataccaaatacttggtgtgttccttctcattcagctgtgtatc
attgctgctgaaggtctccgccgcagcaatttatcttctattgcaagttcagttcatcag
acatccttggtgtcccaccaaactgcaggacgtggtttgcctgtcttgaatgaagaaggc
aatttgatacctttggaggctggcagtgggaattgggtatcagattccacgtcaacttca
gagtctaatgcaataagcagcagcaaatgcacactctgcttgagtaatcggcaataccca
accgctacagcttgtggtcatgtgttctgctggaattgcattatggaatggtgcaatgag
aagcctgagtgcccactctgccgtacccccataactcattcaagcttagtttgtttgtat
cattcagacttctag
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