Populus nigra (Lombardy poplar): 133690169
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Entry
133690169 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase RHF2A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133690169
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133690169
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133690169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
133690169
NCBI-ProteinID:
XP_061966370
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All DBs
Position
3:complement(6587112..6591581)
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AA seq
389 aa
AA seq
DB search
MEVLEVDEAKKPEVHMTSAAAFVEGGIQESCDDACSICLEDFCESDPSTVTNCKHEFHLQ
CILEWCQRSSECPMCLRSISLKDPTSQELFEAVERERKIRAAPSRNATIFHHPTLGDFEL
QHLPVGVSDSELEERIIQHLAAAAAMGRTGHFGRGGGQRNRPSPHGRPHFLVFSTHPGAQ
PSGHVSSSLSQLGRENEPAAGSVASPSTPLTSVEDEPSQQALQLPPILTDQSSSASGSTV
MRQGLSFNNRSTSSQSAPPNQDRAGPSEFQSFSVSLKSRLNAVSMRYKESISRSTRGWKD
RLFSRNNSVSDLGSEVRRDVNAGIATVSRMMERLETRDNSGANQVSVSTHWTDRPAAERS
NQNNAETHIESPVNEGSTPVSCAASSAST
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaggttctggaggtggatgaagcaaagaaacctgaagttcatatgacatcagctgca
gcatttgtggaaggggggatccaggaatcatgtgatgatgcatgtagcatttgcctcgaa
gatttttgtgaaagtgatccctcaacggtcactaattgcaagcatgagttccatcttcag
tgtatccttgaatggtgtcagagaagctctgagtgtccaatgtgtttgcgatccatcagt
cttaaagatcccaccagtcaagaattgtttgaggctgtagaacgggagaggaaaatcaga
gctgctccatcaagaaatgctactatttttcatcatcctacgcttggggatttcgaattg
cagcatctaccagttggtgtaagtgattctgaacttgaggagcgtataatccaacacctg
gctgctgctgctgctatgggaaggaccggccactttggcagggggggagggcagagaaac
aggccatctccccatggtcgtccacacttcttggtattttctactcatcctggtgcacag
ccttctggtcatgtttcatcctctctgtctcagctgggcagggaaaatgaaccagcagca
ggctctgtagctagcccatccacaccactcacttctgtcgaggatgaaccatcgcaacaa
gccttgcaattgcctcctattttaactgatcaaagttcctctgcatctggatccacagtg
atgcgccaaggactttcctttaataaccggagcacttctagtcagtctgcaccgccaaat
caagatagagcagggccatcagaattccagtcattttcagtctccctgaaatctaggctt
aatgcagtttcaatgaggtataaagagtcaatttcaagaagtacaagagggtggaaggat
aggctattttctcgtaacaattcagtgtctgatcttggctctgaagttcgaagagatgta
aatgcaggaattgcaactgtatctcgtatgatggagcgccttgaaaccagagataacagt
ggagccaaccaagtttctgtatcaactcattggactgatcgtccagctgctgagaggagc
aaccagaataatgctgagactcacatagagagccctgtaaatgaaggaagtacgccagtt
tcttgtgctgcaagttcagcatctacttaa
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