Populus nigra (Lombardy poplar): 133690178
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Entry
133690178 CDS
T10372
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133690178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pnz03051
]
133690178
Proteasome [BR:
pnz03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133690178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_16
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
AAA_28
NPHP3_N
TIP49
RNA_helicase
Mg_chelatase
AAA_14
Sigma54_activat
IstB_IS21
AAA_7
AAA_24
TsaE
AAA_18
Parvo_NS1
AAA_30
NTPase_1
NB-ARC
ATPase_2
AAA_3
DUF3450
NACHT
DUF5906
AAA_33
ATPase
ABC_tran
AAA_11
AAA_25
AAA_19
AAA_17
DUF6570
Motif
Other DBs
NCBI-GeneID:
133690178
NCBI-ProteinID:
XP_061966382
LinkDB
All DBs
Position
3:complement(25113196..25117144)
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AA seq
412 aa
AA seq
DB search
MSTMVLDPRPAPTVEPRSDLVPDPTTVPTEDDDLYSRLKSLQRQLEFIDIQEEYVKDEQK
NLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQTNGIVGSTTGSNYYVRILSTIDRELLKP
SASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLT
HHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRM
VRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVK
VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDMEDYVSR
PDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatggtacttgacccgagacccgccccgacggtggagccaagatcggacctt
gtacccgacccaacaacagtacccacggaagacgacgacctctacagccgcttaaaatct
ctgcaacgacagctagaattcatcgacatacaagaggagtatgtcaaggatgagcagaag
aatctgaagcgagagctacttcgtgcgcaagaagaggtgaagcggatccagtcggtgccg
cttgtaatcgggcagtttatggagatggtggatcagacaaatgggattgttgggtctact
acgggttcgaattattatgtgaggattttgagtacgattgatagggaattgttgaagccg
tcggcttctgtggctttgcatcggcattcgaatgctcttgttgatgttttgccacctgag
gctgattctagtatttctctgcttagtcagagtgagaaacctgatgttacttacaatgac
attggaggatgtgacattcaaaagcaggaaattcgtgaggcggttgagttgccactgact
caccatgaactttacaaacaaattggcattgacccccctcgtggtgtgttgctctatggt
ccacctggaactggaaaaactatgctcgccaaggctgttgctaatcatacaactgcagcc
tttattagagttgttggctctgagtttgttcagaagtatctgggtgagggaccccgcatg
gttcgtgatgtttttcgtcttgctaaagagaacgccccagcaattatttttattgatgag
gtagatgctattgctactgctaggtttgacgctcaaactggagctgatagagaagttcag
cgtattctgatggaactactgaatcagatggatgggtttgatcagacggtaaatgttaag
gtcataatggcaactaatagggctgacactttggaccctgctcttctgcgtcccggaaga
cttgaccggaaaattgaatttcctttgcctgatagacggcaaaagaggcttgttttccag
gtttgcaccgctaaaatgaatttaagtgatgaggtggacatggaggattatgtgtctcga
cctgataaaattagtgctgccgagatcgcagctatctgccaagaagcaggcatgcatgca
gtacgcaagaacaggtatgtcattctccccaaggacttcgagaaaggctaccgaaccaat
gtgaagaagcctgacactgactttgagttctacaagtga
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