Populus nigra (Lombardy poplar): 133690196
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Entry
133690196 CDS
T10372
Name
(RefSeq) proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1
KO
K18213
proteinaceous RNase P [EC:
3.1.26.5
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133690196
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
133690196
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
133690196
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRORP
PPR_long
TPR_24
PPR
PPR_3
RNase_Zc3h12a
PPR_1
Motif
Other DBs
NCBI-GeneID:
133690196
NCBI-ProteinID:
XP_061966399
LinkDB
All DBs
Position
3:12576136..12582014
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AA seq
887 aa
AA seq
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MACFTSNILQHKHVLSITLCKYPSPSLHACKFHLLSHFPGSSPPKHTPLLVATTLASNIL
HAKLSATDHDSPTKTINSRTRKENNALGFPSSRRIAKRVERKHVKNLTTSVVDEKTEKRF
SKDRSTRKNMGFRECTGMGSENCTKDGKKGIRFLATMDSQGVCGEMESRTKNGSDIQVIK
VDKIGKGSKQDKVDSSELKLRVRLDMCSKRGDVIAAIQLYDLAQREGIKMGQYHYAVLLY
LCSSAAVGGVQPAKSGSENGRRAIDSLDVSNEVSNVKFQELSELRDEDDRKVGATELHIR
VSNNRKKLVDADREPGSIAEMELNHGSTFGNLDDKESLVQFCNECNKLNFQHLDGRPSHG
KDKDVNMHGNHEIQFSEDVKKYALQRGCEIFEKMCKEKVPINEATLTAVARMAMSIGNGD
LAFEMVKQMDALGINPKLRSYGPALSVFCSSGDIDKAFYVEKHMLEHGVYPEEPELKALL
RVSVEGGKGDKVYYLLHKLRRIVRRVSPSTAGIIVRWFNSKAASRVGKTKWDVKEAIENG
GGGWHGQGWLGKGKWTVSCTSVGLDGICKYCGQKLTTIDLDAVETEKFAESVASIAIKRD
RDSSFQRFQKWLDYYGPFEAVIDGANVGIYNQGRFMPSKINAVVNGIRQKLPSKKWPLIV
LHNKRITGRKMDGPVNKAFIEKWKNADALYATPTGSNDDWYWLYAAIKFKCLIVTNDEMR
DHTFHLLGNDFFPRWKERHQVHFRFTDAGPDFDMPPPCSVVIQESEKGHWHIPIETEGEG
EGEAEREWLCITRANSRTTTHSITTTPGGSQSVGHGKKQARSSMQTRVAIKPDRLKHNIP
DNIRKPPRDYKNLKNILAASGFPDHRTVLSEIETAEELGDTVIDFQI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcttcacctctaacattctgcagcacaagcatgtactctcaatcactctctgt
aagtatccatcgccatctcttcatgcttgcaaatttcaccttttatctcactttcctggt
tcctcacctccaaagcacacaccgcttcttgtagctacaacacttgctagtaacatacta
catgcaaagttatctgcaactgaccatgatagtccaaccaaaaccattaattcaagaacc
agaaaggaaaataatgcattggggttcccttcttcaagaagaatagctaaaagggtagag
agaaaacatgtcaaaaaccttactacttctgtagttgacgagaagactgagaagcggttt
tcgaaggatagaagtacaagaaagaatatgggttttagagaatgtacaggaatgggttct
gagaattgtactaaagatgggaaaaagggcattagatttttggcaactatggacagtcaa
ggagtatgtggtgaaatggagagtagaacaaaaaacggtagtgatattcaagttattaaa
gtggacaaaattggaaaagggtctaaacaagacaaggttgattcatcagaactcaagtta
cgagttaggttggatatgtgctcgaaaagaggagatgtgatagctgcaattcaattatat
gatttagctcagagagaaggaatcaagatggggcagtatcattatgctgtacttttgtat
ctttgttcctctgctgctgttggtggtgttcaaccagctaaaagcgggagtgagaatggt
aggcgagccatcgattcattagatgtgtctaatgaagtttcgaatgtaaaatttcaggag
ttgagtgaattaagggatgaggatgatagaaaagttggtgctactgaattgcatattcgt
gtttccaacaataggaagaaattagtcgatgctgatagagaacctggaagtatagctgaa
atggagttgaatcatggcagtacgtttggtaatttagatgacaaggaaagtttggtccag
ttttgcaatgagtgtaacaagctaaactttcaacacttggatggacggccttcacatgga
aaggataaagatgtcaatatgcatggcaatcatgaaattcagttcagcgaagatgtcaag
aagtatgcacttcaaaggggctgtgagatctttgagaaaatgtgcaaggaaaaggtccca
ataaatgaagcaaccttgacagctgtggcaagaatggcgatgtcaattggtaatggtgat
ctggcctttgaaatggtgaaacagatggacgcattggggataaatcctaaattgcggtcc
tatggacctgctctatctgtgttttgcagtagtggagacatcgacaaagcattttatgta
gagaagcacatgttggaacatggtgtttatccagaggagcctgaattgaaggcactctta
agagtaagtgtagaaggtggtaaaggtgacaaagtttattatttgctgcataaactacga
agaattgtaaggagggtctcaccctctactgcaggcataattgttagatggtttaacagc
aaggcagcttcaagagtgggaaaaacaaaatgggacgttaaagaagcaattgaaaatgga
ggtggaggttggcatgggcaaggttggctgggtaagggaaagtggactgtttcttgtaca
tctgttgggctggatggaatttgcaagtactgtggacagaaattgaccacaattgacctt
gatgctgttgaaacagagaaatttgccgaatcagttgcttctattgccataaaacgtgac
agagattcaagctttcaaagatttcaaaaatggcttgattactatggaccttttgaagca
gtgatagacggagcaaatgttggtatttacaaccagggaaggttcatgccatcaaagatc
aacgctgttgttaatggtatacgtcagaagcttccttcaaaaaaatggccactcattgtt
ctgcataacaagcgaatcactggacgcaagatggatggaccggtaaataaagctttcatt
gaaaagtggaaaaatgctgatgcactttatgcaacacccactggatcaaatgatgattgg
tactggttgtatgcagctataaagttcaagtgtttaattgtgaccaatgacgagatgaga
gaccatacatttcatcttctaggaaacgacttcttccctagatggaaagaaaggcatcag
gtgcatttcagatttactgatgctggtccagattttgacatgcctccgccttgctctgtt
gtaattcaggaatcagaaaaaggtcactggcacattccaattgaaacagaaggagaaggc
gaaggcgaagcagaaagagaatggttatgcattacacgggctaactcgcgaacaacaaca
cattctatcaccaccacgcctggaggatcacagtctgttggacatggtaagaagcaagca
aggtcctccatgcagactagagttgcgataaagccagatcgcttaaaacataacatcccc
gacaacatacgaaagccacctcgagactacaagaatctcaaaaatattcttgcagcatca
gggttcccagatcatcgcactgttctatcagaaattgagacagcagaggaacttggagac
actgttattgacttccagatataa
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