Populus nigra (Lombardy poplar): 133690235
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Entry
133690235 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133690235
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133690235
Membrane trafficking [BR:
pnz04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
133690235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
133690235
NCBI-ProteinID:
XP_061966446
LinkDB
All DBs
Position
3:15792351..15795527
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AA seq
453 aa
AA seq
DB search
MASFEGKVQFCKVEKEKNAYPNVDDYIDDPLWPVPKRDYLDDSTDDDDDPRFPANFNRLP
EVNLKNVLSGIVAILTGQNKDGGGGGGGRMPSSNVSFLESEKNGDTYLHSSVYIPSAPPL
LEPNYTTVYKDVLEAEPPEWLPDSSTTVCMQCTAPFTAISRGRHHCRFCGGVFCRTCTKG
RCLLPVKFRERNPQRVCDTCYDRLDPLQGVLINTISNAMQVAKHDVVDWTCTRGWLNLPV
GFSMEHEVYKASNTLRSYWQVSRLNPEKSIPLAILKGAKGLAILTVAKAGAIVAYKLGTG
LVIARRSDGSWSAPSAICLVGLGWGAQIGGELMDYIIVLHDYKAVKTFCSRMHFSLGAGC
SAAAGPVGRVLEADLHAGDRGSGMCYTYSCSKGAFVGVSLEGSILATRTETNLKFYGDPY
LSTADILLGTVDRPKAAEPLYAALGELYSSLQH
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttttgaagggaaagttcaattctgtaaggtagaaaaggagaagaatgcatac
cctaatgttgatgactatatcgatgatcccttatggccggtgccgaaacgggattacctt
gatgattcaactgatgatgatgacgatcctcgttttcctgcaaatttcaataggcttcca
gaggtcaacttgaaaaatgtattaagtgggatagttgccattttaactggccagaataaa
gatggtggtggtggtggtggtggtcgaatgcccagttcaaatgtttcctttctggaatcg
gagaagaatggggacacgtatttgcactcctctgtttatattccgagtgccccgccactt
ctggagccaaattataccaccgtgtacaaagatgtcttggaagctgaaccgcctgagtgg
ttgccagatagttctactacagtttgtatgcagtgtactgctccctttacagcaatttct
cgtggaaggcatcattgtcgtttttgtggtggggttttttgcagaacatgtactaaagga
cggtgtttgttacctgttaagtttagggagaggaatccacaaagggtttgtgatacctgc
tatgataggcttgatcctttgcaaggtgttcttattaataccattagcaatgctatgcaa
gtggcgaaacatgatgtcgtggattggacttgcacgagagggtggttaaacctgccagtt
ggtttctccatggaacatgaggtatacaaagcatccaatacgttgagaagctattggcag
gtttctaggctgaatcctgagaagtccatccccctagcaattctgaaaggagccaaaggc
ttggcaatcttaaccgttgccaaagctggtgcaatagttgcttacaaacttggcactggt
ttagtcattgctcggagatctgatggatcatggtctgccccatctgccatatgtttggtt
ggcttaggatggggtgctcagattgggggtgagctcatggactatataattgtcctccat
gattacaaagctgtgaagacattttgtagtcgcatgcatttttctcttggggctggttgc
agtgctgcagcaggccctgttgggagggtgctggaagcagatcttcatgctggggataga
ggatctggcatgtgctatacttacagctgtagcaaaggggcatttgtgggagtatcactt
gaaggaagtattttagctacgaggacggaaaccaatctaaagttctatggtgatccttat
ctctctactgctgatattcttcttggaactgtggacagacctaaagctgcagaaccacta
tatgctgctcttggagagctgtactcaagtctacagcattag
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