Populus nigra (Lombardy poplar): 133690374
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Entry
133690374 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133690374
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133690374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133690374
Spliceosome [BR:
pnz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
133690374
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Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
133690374
NCBI-ProteinID:
XP_061966633
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Position
3:26652540..26657119
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AA seq
557 aa
AA seq
DB search
MKNKREEDDMGSEVSGSVLKRQRVDEQSSASGIGNPLVPYNDVDDEDEDFERGKTNNGGG
VEESNTQVVAADNGEDEEEEEDVYGQGDSLERRKSQFEPREDCPYLDTVNRQVLDFDFEK
FCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEII
DPSLDDIRHVLNPRFTRDQVGQIDKNRQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQS
LMRVTPLRNFFLIPENYQHCKSPLVQRFGELMRKIWHARNFKGQVSPHEFLQAVMKVSKK
RFRIGQQSDPVEFMAWLLNTLHANLRTSKKNNSIIYECFQGELEVIKESPNKAITEKKQN
ADDQNSDQRITDGGTKHDIFTETSRMQFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILK
KFDGDTVTEVVRPRVARMKYHVTRLPRYLILHMQRFKKNNFFIEKNPTLVNFPVKNLELK
DFIPLPMPKENERLRSKYDLIANIVHDGKPNEGFYRVFVQRKSEELWYEMQDLHVSETLP
QMVALSEAYVQIYEQQQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagagggaagaagatgatatggggagtgaagtaagtggtagtgttttaaag
aggcagagagtggatgaacagtcttcagcttctggtattggaaacccacttgtgccttac
aatgatgtggatgatgaagacgaggactttgaaagggggaaaacaaataatggtggtggg
gtggaggagagtaatacacaagttgttgcggcggataatggtgaggatgaggaggaggaa
gaggatgtgtatggacaaggggatagtttggaaaggaggaagagtcaatttgagcctcgt
gaagattgcccgtatttggatactgttaatcgacaggtgttggattttgattttgagaaa
ttttgctctgtttctctgtcgaatttgaatgtgtatgcatgcttagtttgtgggaagtat
taccaaggaagagggaagaaatcccatgcttatactcatagtcttgaagcaggacaccat
gtgtacatcaatcttaggacagagaaggtttattgtcttcctgatggatatgagattatt
gacccatcacttgatgacatacgacatgttctcaatccaagatttaccagggatcaagtt
ggacagattgacaaaaacaggcaatggtccagggcacttgatgggtctgattaccttcct
ggaatggtgggtctgaataacatcaaggaaactgattttgtgaatgtaacaattcagtct
ctaatgagagttacacccttaaggaatttcttccttatccctgaaaactatcagcattgt
aagtctcctcttgttcaacgctttggagaactcatgcgtaaaatatggcatgctcggaac
tttaaaggacaggtgagtccacatgaatttctccaggcagttatgaaagttagtaagaaa
cgttttcgaataggacaacagtctgatcctgtggagttcatggcatggcttcttaatacc
ctgcatgcaaatcttagaacttcaaagaaaaataacagtatcatttatgagtgctttcag
ggtgagttggaggttattaaagagagtcctaacaaagctatcactgagaagaaacaaaat
gctgatgatcaaaattctgatcaaagaattactgatggtggaactaaacatgatattttc
acggaaacttctagaatgcaattcttaatgcttggactggatttgccaccacctcctctg
tttaaagatgtaatggagaagaatataatacctcaggttcctctgttcaatatactgaag
aaatttgatggtgatactgtgactgaagttgttcgtcctcgtgttgcccggatgaaatat
catgtcaccagattgccacgatatttaatactacatatgcagcgatttaaaaagaacaac
tttttcatcgagaagaatcccaccttagtcaactttcctgtgaagaacttggaattaaaa
gattttattcctttgccaatgcctaaagaaaatgagagattgcgctcgaagtatgatttg
attgcgaacattgtccatgatggaaagcctaatgaggggttctacagggtttttgtgcag
cggaagtcagaagagctatggtatgagatgcaggatctgcatgtttctgaaacccttcct
cagatggttgcgctctctgaggcatatgtgcagatatatgagcagcagcagtag
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