Populus nigra (Lombardy poplar): 133690621
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Entry
133690621 CDS
T10372
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133690621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pnz03051
]
133690621
Proteasome [BR:
pnz03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133690621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
AAA_2
RuvB_N
AAA_22
nSTAND3
PRS7_OB
DUF815
Prot_ATP_ID_OB_N
TIP49
AAA_7
IstB_IS21
Parvo_NS1
AAA_14
RNA_helicase
AAA_33
Mg_chelatase
AAA_18
Sigma54_activat
AAA_28
AAA_3
AAA_24
TsaE
NPHP3_N
AAA_11
NACHT
AAA_lid_PRS2_C
bpMoxR
TPR_MLP1_2
ABC_tran
ATPase
AAA_25
ATPase_2
ResIII
AAA_30
PhoH
AAA_19
NB-ARC
Motif
Other DBs
NCBI-GeneID:
133690621
NCBI-ProteinID:
XP_061966833
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Position
4:2089255..2092385
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AA seq
402 aa
AA seq
DB search
MATISNDGEDAARRRTAEADYRKKLLNHKELESRVRSTRENLKAAKKEFNKTEDDLKSLQ
SVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRAL
PREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFIRVGIKPPKGVL
LYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIF
MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLR
PGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGDIDYEAVVKLAEGFNGADLRNVCTEAG
MSAIRAERDYVIHEDFMKAVRKLNEAKKLESTAHYNADFGKD
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgataagcaacgatggagaagacgcagcgcgacgtcgtactgcagaggcggat
tatcgcaagaagttactcaaccacaaagagctcgaatccagagttcgatctacgagggag
aatttgaaagctgcaaaaaaagaatttaacaaaacagaagatgatttgaagtctcttcaa
agtgttggtcagattataggagaagttcttcgacctcttgacaatgaacgcttgattgtc
aaagcgagcagcgggccgaggtatgtggtaggctgccgtagtaaggtggataaggaaaaa
ctgacttcaggaactagagtggttcttgatatgacaacacttacgatcatgcgagctctt
ccacgtgaagttgacccagttgtttataacatgctgcatgaagatcctggtaatgtgagc
tactcagctgtgggtggtttatctgatcagattagagaattgagggaatctattgagcta
cctttgatgaaccctgagcttttcattagagtggggattaagcctccaaagggtgtcctt
ctttatggacctcctggtactgggaagacattgctggctagggctattgcaagcaacata
gatgccaactttttaaaggttgtttcaagtgccatcattgacaaatacattggagaaagt
gctaggttgatccgagaaatgtttgggtatgcacgtgatcatcaaccctgcatcattttc
atggacgagatagatgcaattggtggacgccgttttagtgagggaacaagtgctgatcgt
gaaattcaaagaacattgatggagttgcttaatcaacttgatggatttgatcagcttggg
aaggttaaaatgataatggccacaaaccgccctgatgttcttgaccctgcacttcttcgt
ccaggaagattagacagaaaaatagagattccactaccaaatgaacagtcaagaatggaa
atccttaagatccatgctgctgggattgccaagcatggggatattgattatgaggctgtt
gtgaaacttgcagagggttttaatggagctgatcttcgtaatgtctgcacggaagctgga
atgtcagcaatccgtgcagaacgtgattatgtcatccatgaagattttatgaaggccgta
cgaaaacttaatgaagcaaagaaactcgagtctaccgcgcactacaatgctgattttggc
aaagactag
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