Populus nigra (Lombardy poplar): 133690695
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Entry
133690695 CDS
T10372
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133690695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133690695
03036 Chromosome and associated proteins [BR:
pnz03036
]
133690695
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133690695
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133690695
PBAF complex
133690695
GBAF(ncBAF) complex
133690695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
133690695
NCBI-ProteinID:
XP_061966935
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Position
4:283838..287462
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AA seq
500 aa
AA seq
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MASVAPAPPSLHPKIPLSSPVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFS
WDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDV
GSIRRVFDFLDAWGLINYSPLNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASNT
KENCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEARTD
WTEKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGGVDSK
YNQIKDCDDDESGPNGNGSPSPSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAARA
AVTTLTEVEYGGSKGSLEFVSRVTKHLDSGVASNGDTNLNASVKACLDANSLLEKEESDV
ERAISRITEVQMKEIQDKILRFEELDLQMEKEWQQLDQMKNLLFADQLSVLSKRSLTTKI
DERGSTLKAEERGDENAKTD
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagtagcacccgcaccaccatctctccaccccaaaatccctctatcttctccc
gtcaaacctgagattcaacctcccacaaccgccgccccttctccccgaccaccacaacca
cctcctccctcctccgaacccgacgtcgtccacatccctagctactcccgctggttttca
tgggacaacatacacgaatgcgaggtccgattcctcccagaattcttcgattcgcgatcg
ccttcgaaaaaccctagtgtttacaagtactacaggaactcaatcatctcccaattcagg
aaaaacccttccgccaaactcacttttactgaaatcaggaagactcttgtaggcgatgtg
gggtccattcgtagggtttttgatttcttggatgcttggggtttgatcaattactcccct
ttgaataagcaattgaagtgggaagatggtaaggattcttcttccaagactgctgcttcg
cccgccggtggtggtggtggtgatggagggactgccggtgatgctaatgctagtaatact
aaggaaaattgtaagagattgtgcagtggttgtaagtctctctgtagcattgcttgcttc
ttttgcgataagtatgatataactctttgtgcccggtgctatgtgcgtggaaactatcgg
gttggtgtcagttcatcggatttcaggcgggtggagataagtgaagaggcaaggacagat
tggacagagaaagagactttgcaacttcttgaagctgttatgcattatagggatgactgg
aagaaggttgcgcaacatgttggtggtagaagtgagaaggactgcattactcattttatc
aagcttccttttggagaggtttttactgattatacagacgtagggggtgttgacagcaag
tataaccaaataaaggactgtgatgatgatgaatctggaccaaatggtaatggttctcca
tccccaagtaaaaaaatacgtctctcacctcttgtggatgcaagcaacccaataatggct
caggctgcttttttatcagctttggcgggcacagaggttgcagaagctgcggctcgagca
gctgtaactactctgactgaggtggaatatggaggaagtaaaggcagtcttgaatttgtt
tccagggttacaaaacacctagattctggtgttgcatcaaatggtgacaccaatctaaac
gcttcagtaaaagcttgtttggatgcgaattcacttctggagaaggaagagtcggatgtg
gagagagcaatttccaggattacagaagttcagatgaaagagattcaagataagattctt
cggtttgaggagttggatttgcagatggagaaagagtggcagcagctggaccaaatgaag
aaccttctctttgctgaccagctcagcgttttatctaaaagaagtttaacaacaaaaatc
gacgaacgtggttcaacactgaaagcagaggaacgaggggatgaaaatgcaaaaactgat
tga
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