KEGG   Populus nigra (Lombardy poplar): 133690695
Entry
133690695         CDS       T10372                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3B
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    133690695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pnz03021]
    133690695
   03036 Chromosome and associated proteins [BR:pnz03036]
    133690695
Transcription machinery [BR:pnz03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     133690695
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    133690695
   PBAF complex
    133690695
   GBAF(ncBAF) complex
    133690695
SSDB
Motif
Pfam: SWIRM Myb_DNA-binding SWIRM-assoc_1 Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 133690695
NCBI-ProteinID: XP_061966935
LinkDB
Position
4:283838..287462
AA seq 500 aa
MASVAPAPPSLHPKIPLSSPVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFS
WDNIHECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDV
GSIRRVFDFLDAWGLINYSPLNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASNT
KENCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEARTD
WTEKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGGVDSK
YNQIKDCDDDESGPNGNGSPSPSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAARA
AVTTLTEVEYGGSKGSLEFVSRVTKHLDSGVASNGDTNLNASVKACLDANSLLEKEESDV
ERAISRITEVQMKEIQDKILRFEELDLQMEKEWQQLDQMKNLLFADQLSVLSKRSLTTKI
DERGSTLKAEERGDENAKTD
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggcctcagtagcacccgcaccaccatctctccaccccaaaatccctctatcttctccc
gtcaaacctgagattcaacctcccacaaccgccgccccttctccccgaccaccacaacca
cctcctccctcctccgaacccgacgtcgtccacatccctagctactcccgctggttttca
tgggacaacatacacgaatgcgaggtccgattcctcccagaattcttcgattcgcgatcg
ccttcgaaaaaccctagtgtttacaagtactacaggaactcaatcatctcccaattcagg
aaaaacccttccgccaaactcacttttactgaaatcaggaagactcttgtaggcgatgtg
gggtccattcgtagggtttttgatttcttggatgcttggggtttgatcaattactcccct
ttgaataagcaattgaagtgggaagatggtaaggattcttcttccaagactgctgcttcg
cccgccggtggtggtggtggtgatggagggactgccggtgatgctaatgctagtaatact
aaggaaaattgtaagagattgtgcagtggttgtaagtctctctgtagcattgcttgcttc
ttttgcgataagtatgatataactctttgtgcccggtgctatgtgcgtggaaactatcgg
gttggtgtcagttcatcggatttcaggcgggtggagataagtgaagaggcaaggacagat
tggacagagaaagagactttgcaacttcttgaagctgttatgcattatagggatgactgg
aagaaggttgcgcaacatgttggtggtagaagtgagaaggactgcattactcattttatc
aagcttccttttggagaggtttttactgattatacagacgtagggggtgttgacagcaag
tataaccaaataaaggactgtgatgatgatgaatctggaccaaatggtaatggttctcca
tccccaagtaaaaaaatacgtctctcacctcttgtggatgcaagcaacccaataatggct
caggctgcttttttatcagctttggcgggcacagaggttgcagaagctgcggctcgagca
gctgtaactactctgactgaggtggaatatggaggaagtaaaggcagtcttgaatttgtt
tccagggttacaaaacacctagattctggtgttgcatcaaatggtgacaccaatctaaac
gcttcagtaaaagcttgtttggatgcgaattcacttctggagaaggaagagtcggatgtg
gagagagcaatttccaggattacagaagttcagatgaaagagattcaagataagattctt
cggtttgaggagttggatttgcagatggagaaagagtggcagcagctggaccaaatgaag
aaccttctctttgctgaccagctcagcgttttatctaaaagaagtttaacaacaaaaatc
gacgaacgtggttcaacactgaaagcagaggaacgaggggatgaaaatgcaaaaactgat
tga

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