Populus nigra (Lombardy poplar): 133690793
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Entry
133690793 CDS
T10372
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133690793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133690793
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
133690793
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Gene cluster
GFIT
Motif
Pfam:
Sec1
CcmH
Motif
Other DBs
NCBI-GeneID:
133690793
NCBI-ProteinID:
XP_061967040
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Position
4:complement(5037355..5043818)
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AA seq
568 aa
AA seq
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MVLVSAARDYINRLLQDISGMKVLILDSQTVSIVSVVYSQTELLQKEVFLVELVDSIWKS
KEPMSHLKAVYFLRPTSENIQHLRRQLANPRFGESHLFFSNILNDTQIHILADSDEQEVV
QQVQEYYGDFVAIDPYHFTLNIPSNHMYMLPAVVDPPGLQHFCDRVVDGIAAVFLALKRR
PVIRYQRTSDIAKRVAQETSKLMYQQESGLFDFRRTEISPLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIHDNKVDLSSISKLPKDQQEVVLSSEQDAFFRANMYENFGDIGMNIKKMV
DDFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVEERRLMLVSE
MEQDLACNSGQVAAFEAVTNLLNNENVSDIDCLRLVMLYALHYEKESPVQLMQLFNKLAS
RSPKYKPGLVQFLLKQAGVDKRTGDLYGNRDLLNIARNMARGLKGVENVYIQHQPLLFQT
MESIIKGRLRDVDYPFVGNHFQQGRPQDVVIFIVGGTTYEESRSVALQNASISGIRFILG
GSAVLNSKRFLKDLEEAQRIAKSSTNVV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtatctgctgcacgtgattacataaaccgattgttgcaggacatctccggc
atgaaggttctcattctcgattcccaaacggttagcattgtaagtgttgtgtattcacaa
acagagttacttcaaaaggaagtgtttttggtagagttggtagattctatatggaagtcg
aaagaaccaatgtcacatcttaaagcagtctacttccttcgcccaacgtcggagaatatt
cagcatttgcggcgtcagctggctaatcctagattcggagagagtcatttatttttctcc
aacattttgaatgatactcagattcatatcctagctgattcggatgaacaagaagttgtg
cagcaagtgcaggagtattatggagactttgttgctattgatccttatcacttcactttg
aacatcccttcaaatcacatgtatatgctcccagccgttgtagatcctccaggtttgcag
cacttctgtgatagggttgttgatggtatagcagcagtctttttggcattgaaacggaga
cctgttattcgatatcaaaggacctctgatattgcaaaaagggtagcacaggaaacatca
aagctgatgtaccagcaggaaagtggccttttcgatttcagacgtacagaaatttctcct
ctgttgcttgtaattgatcgaagggatgaccccgttacaccattactaaaccaatggaca
tatcaggctatggttcatgaattgataggtattcatgataacaaggtggacttgagtagc
atcagcaaattaccaaaagatcagcaggaggttgtattgtcatcagagcaagatgccttc
ttcagagctaatatgtacgagaactttggagatattggaatgaacatcaagaagatggtg
gatgattttcagcaagttgcaaaaagtaaccaaaatatccaaacaatagaagacatggcg
aagtttgttgacaattaccctgagtacagaaaaatgcatggcaatgtttcaaagcatgtg
acattggtcacagaaatgagcaagatagttgaagagcgaaggctcatgttagtttcagaa
atggaacaggatttggcttgcaatagtgggcaagtggctgcatttgaggcagtgacaaat
cttctaaacaatgaaaatgtttctgatattgactgtctacgcttggtgatgttatatgca
ttgcactatgagaaggagagccctgttcagttgatgcagctttttaacaaactggcttct
cgatctcccaagtacaagcctgggctagtccaattcctcctgaagcaagcaggtgtggat
aagcgaaccggtgatctttatgggaaccgagatcttctaaatattgctcgtaacatggct
cgtggtctgaagggggttgaaaatgtatacatccaacatcagcctcttctgttccaaact
atggaaagcataatcaaggggagattgagagatgtggactatccatttgttggtaatcac
tttcaacaggggaggccgcaagatgtggttattttcattgttggtggaacaacatacgag
gagtcacgctctgttgctcttcaaaatgccagcatttctggaattcgttttatacttggt
ggttccgcagttctcaattctaagaggttcctgaaggacctggaagaagctcagagaata
gcaaaatccagcaccaatgtcgtttga
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