KEGG   Populus nigra (Lombardy poplar): 133690841
Entry
133690841         CDS       T10372                                 
Name
(RefSeq) uncharacterized protein LOC133690841
  KO
K25059  replication stress response regulator SDE2
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133690841
   03032 DNA replication proteins [BR:pnz03032]
    133690841
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133690841
Spliceosome [BR:pnz03041]
 Complex C
  Other components
   Complex C specific factors
    133690841
DNA replication proteins [BR:pnz03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    133690841
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    133690841
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin DUF2161 TonB_N
Other DBs
NCBI-GeneID: 133690841
NCBI-ProteinID: XP_061967094
LinkDB
Position
4:12946467..12949645
AA seq 498 aa
MGKWLSFQFKGILPPFPSLTKIFSISFPSPKPKPKPKPAAMEDHKDPMPFQIFAKFLDGK
TKVLNFKTPSSCTAQAIKQQIFQVTQIPIHYQRLMCRGLQLNDDAIITTPESTVCLLLRL
LGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKKLEEWKAEEEDRRMEK
MAEEFIKKKAKKGKKGVGDGEAEKYVAKYREDSAKCAAVVEEAVREVLGNGNGFRKRKGK
GKGVVDGAEAKKLKIWMGKRKVDESDSEGMDEDSSDEENEKSVVLNNGSHSDSNKEVEGN
SDSVTGIRDGECSGGASCSSEEEKEASSERSLKSNPCGEVALNKEDELVEAQILEETVAQ
NANVACLKTEEISETEALEAEKKENVGPDSQCPDASSSGNGGIIESGLVIPEANGFSQSK
PESNELVNEGNGDMEKPLIFDEFNSASELEVLGMERLKTELQVRGLKCGGTLQERAARLF
LLKSTPLEKLPKKLLAKK
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgggaaaatggctttcctttcaatttaagggcatcctgcctccattcccctctttgacc
aaaatcttctcaatcagtttcccttctccaaaaccaaaaccaaaaccaaaaccagcagca
atggaagatcacaaggatcctatgcccttccagatcttcgcaaaatttctagacggcaaa
acaaaagtcttgaatttcaaaaccccaagctcatgtaccgcccaagcaatcaagcagcaa
atcttccaagtcactcaaatccctattcactatcaacgcttgatgtgcagagggttgcaa
ttaaacgacgatgcaatcatcactacccccgaatccaccgtctgtcttctcctccgtctc
ctaggtggcaaaggcggtttcgggtcacttctccgtggggccgctacaaaagcgggccaa
aagaagacgaataattttgacgcgtgtcgggatatgagtggaaggaggttaaggcatgtg
aatgcggagaagaagttggaggagtggaaggcggaggaagaggataggaggatggagaag
atggcggaggagtttattaagaagaaggctaagaaagggaagaaaggggttggagatggt
gaggcggagaagtatgtggcaaagtatagggaggactcggcgaaatgtgctgcagtagtt
gaggaggctgtgagggaggttcttgggaatgggaatgggtttaggaagagaaaggggaag
gggaagggggttgtggacggcgcagaagcgaagaaattaaagatttggatgggcaagaga
aaagtggatgaaagtgacagtgaaggaatggacgaagatagcagtgatgaggaaaatgag
aaatctgttgttttaaataatggtagtcattcagattcaaataaagaagttgagggaaat
tcagactcagttactggaattcgagacggagaatgttctggtggtgcctcatgcagctct
gaggaagaaaaggaggcttcttcagagcgaagcttgaaatctaatccctgtggagaagtt
gccttgaacaaagaggatgaattggttgaagcacagattcttgaggaaacagtagcacag
aatgccaatgtagcttgcttgaagacagaagagatttctgaaactgaagcacttgaggct
gaaaagaaggagaatgttggacctgattctcaatgtccagatgcttcaagttctggaaat
ggaggaattattgaaagcggactggttattcctgaagccaatggtttctctcaatcaaaa
cctgagtcaaatgaattagttaacgaaggcaatggagatatggagaaaccactaattttt
gatgaattcaattcagcatcagagttggaggtacttggcatggaaaggctgaagactgag
ctgcaggtccgtgggcttaaatgtggaggtactttgcaggaacgcgctgcacggcttttc
ctcttgaaatctacccctttggagaagcttcccaaaaaactacttgctaagaaatga

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