Populus nigra (Lombardy poplar): 133690875
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Entry
133690875 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133690875 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133690875
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133690875
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133690875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
133690875
NCBI-ProteinID:
XP_061967125
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All DBs
Position
4:23601140..23603527
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AA seq
215 aa
AA seq
DB search
MSGQTQGVKSPPLRGYRRRKTVLDLNVPPIDGRDEEGTSTTRIEPPQGVQASHQRNGQGP
SLPPPTIDVDAIDDDDDVVESSARAFAQAKNNSRRAAVVDVESGGRFTHNKRRRVPPNQT
IINCDLYINLEGGSSSSSSKRENVQTLPPKEPTFNCPICLCPLVEEMSTKCGHIFWLNQR
RDGTMVIAFWWILIFRMKEFIKLIVRLKMNNALCQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccagactcagggcgtgaagagtcctcctttaagaggatatcggcgaaggaag
accgtgctggacttaaacgttcctccgattgatggaagagatgaagaagggacttcgacc
acccgcattgaacctcctcaaggagtgcaagcaagccaccaacgaaacggacaaggaccg
tctttgccgcctcctactattgatgttgatgctatcgacgacgacgacgacgtcgtcgaa
tcgtcggccagagcgtttgctcaggctaagaacaattcccggagggctgcggtcgttgat
gtagagtcaggtgggcgattcactcacaataagcgtagaagggttccgccgaatcaaacg
atcatcaattgtgatctttatatcaacttggaaggcggaagtagcagcagtagctctaag
agggagaatgtgcagaccctgccgccaaaggagccaaccttcaactgcccgatttgcttg
tgtccattggtcgaggagatgtcaacaaaatgcggacacatattttggttaaatcaaagg
agagatggaacaatggttatagcattttggtggatcctaatttttcgcatgaaggaattt
atcaaacttattgtgcggctcaagatgaacaatgctttgtgtcaatag
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