Populus nigra (Lombardy poplar): 133690982
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Entry
133690982 CDS
T10372
Name
(RefSeq) protein GIGANTEA-like
KO
K12124
GIGANTEA
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133690982
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NCBI-GeneID:
133690982
NCBI-ProteinID:
XP_061967253
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Position
4:4418656..4429904
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AA seq
1170 aa
AA seq
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MASSSSERWIDGLQFSSLFSPPPQDAQQRKAQITAYVEYFGQCTSEQFPDDIAELIRNRY
PSKDKHLFDDVLAMFVLHHPEHGHAVVLPIISCIIDGTLVYDGGSPPFASFISLVCPSSE
NEYSEQWALACGEILRILTHYNRPIYKLEKQNSETDRSSSDGHSTSIESEGKSSTIPLVQ
QERKPYRPLSPWITDVLLAAPLGIRSDYFRWCSGVMGKYAAGELKPPTTTSSCGSGKHPQ
LMPSTPRWAVANGAGVILSVCDEEVARYETATLTAVAVPALLLPPPTTALDEHLVAGLPA
LEPYARLFHRYYAIATPSATQRLLLGLLEAPPSWAPDALDAAVQLVELLRAAEDHASGIR
LPRNWMQLHFLRAIGTAMSMRAGIAADAAAALLFRILSQPALLFPPLRQVEGVEVQHEPL
VGYLSSYRKQIEVPAAEATIEATAQGIASMLCAHGPEVEWRICTIWEAAYGLIPLSSSAV
DLPEIIVATPLQPPILSWNLYIPLLKVLEYLPHGSPSEACLMKIFVATVEAILQRTFPPE
SSRAQTRKTRYLSSLGPPSKNLAVAELRTMIHSLFLESCASVELASRLLFVVLTVCVSHE
AHSNGSKRPRGEENNPPDDGREDSQSTSETPRNIKSRTTKKQGPVAAFDSYVLAAVCALA
CELQMFPFVSRGSNHSTSKHAQTVAKPAKLNGSVSEFQTSLDSAILHTHRILAILEALFS
LKPSSIGTSWSYSSAEIVAAAMVAAHVSELFRRSKACMHALSVLMRCKWDNEIYTRASSL
YNLIDIHSKAVASIVNKAEPLGAHLHTPVWKDSLMCFDGNKQNRSASTVCFNSGQSSVLQ
NEELVHSETKLKCERASHSEEGSGSTSGKGIAGFPFDASDLANFLTMDRHIGFNCSAQVL
LRSVLPEKQELCFSVVSLLWHKLIGSPETQPSAESTSAHQGWRQVVDALCNVVSASPTKA
ATAVVLQAERELQPWIAKDDDLGQKMWRVNQRIVKLIVELMRNHDTPESLVILASSSDLL
LRATDGMLVDGEACTLPQLELLEATARAVQPVLEWGESGLAVADGLSNLLKCRLAATIQC
LSHPSAHVRALSTSVLRDILRTGSIKPSSKHADRNGIHGPSYQYFSPDKIDWQADIEKCL
TWEARSRLATGMSIHHLDTAAKELGCTISI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggctagttcttcttctgagaggtggattgatggtcttcaattctcttcattgtttagt
ccccctcctcaagatgcccagcaaagaaaggcacaaattactgcttatgtggagtacttt
gggcagtgcacatcggaacagtttcccgatgacattgctgagctgatccgcaatcgttat
ccatcaaaggacaagcacctatttgatgatgttttggccatgtttgtccttcatcatccg
gagcatggacatgctgttgttcttccaattatttcatgtattatagatggtacactagtt
tatgatgggggcagccctccatttgcttctttcatttccctagtctgccctagcagcgag
aatgaatattctgaacaatgggctctggcgtgtggagagattttgcggattttaactcat
tacaatcgcccaatatacaagctggaaaaacagaatagtgaaacagacagaagcagtagt
gatggccattctacaagtattgaatcagaggggaaatcctccaccatacctctggtacaa
caagagaggaaaccttacaggcccctgtctccctggatcactgatgtattgcttgctgca
cctctgggtatcagaagtgactactttcgttggtgcagtggtgttatgggtaaatatgct
gctggagagctcaagccaccaacaaccacttcttcctgcgggtctggaaagcatcctcag
ctcatgccatcaactccaaggtgggctgtggcaaatggtgctggggttatattaagtgtg
tgcgatgaggaagttgctcgttatgagactgctacattaactgcggtagctgttcctgca
cttctactccctcctccaacaacagctttggatgagcatctagttgctgggctacctgct
cttgagccatatgcacgtttatttcaccggtattatgccattgcaactccaagtgccact
caacgacttcttcttggacttcttgaagcaccgccatcatgggctcccgatgctcttgat
gctgctgtacaacttgtggaactccttcgagctgctgaagatcatgcatctggcataagg
cttccccggaattggatgcaattgcatttcttacgtgcaatagggactgcaatgtccatg
agagcaggtatagcagctgatgctgctgcagctttacttttccgcatcctctcgcagcct
gcattgctttttcctccactaaggcaagtggaaggggtggaagttcaacatgaacctttg
gttggttatctttcaagctacaggaagcagatagaagtgcctgcagctgaagcgactatt
gaagcaactgcccagggaattgcatctatgctatgtgcccatggacctgaggttgaatgg
agaatttgtaccatttgggaagctgcttacggtctgattcctttaagttcctctgcagtt
gatcttcctgaaatcatagttgcaacaccattgcaacctccaatattgtcctggaatctg
tatatacctctccttaaggtcctggaatatcttcctcatggaagtccttctgaagcatgc
ctcatgaagatatttgttgccacagtggaagcaattcttcagagaacatttccaccagaa
tcatctagagcacagacccgaaaaacaagatatctttctagcttagggcctccctccaaa
aaccttgctgtggcagagcttcgtacaatgatccactctctctttctagaatcatgtgcc
tctgtagagcttgcatcacgactactatttgttgtgttaactgtgtgtgtcagccatgaa
gctcattccaatggcagcaagagaccaagaggtgaagaaaacaatccacctgatgatggc
agagaggattcacaatcgacatctgaaacgccaagaaacatcaaatctaggacgacgaag
aaacaaggtccagttgcagcatttgattcttatgttctggctgctgtatgtgctctggct
tgtgagcttcaaatgttcccctttgtttccagggggagtaatcattcaacttctaaacat
gcacagactgtagccaagcctgcaaaactaaatggatctgtcagcgagttccaaactagt
cttgactctgcaatccttcatactcacagaattttagctattttggaggcacttttttct
ctgaaaccatcttctattggaacatcttggagttatagttcagctgagatagtagctgca
gctatggttgctgctcatgtttctgaactatttagacgttcaaaggcttgcatgcatgca
ctctctgttctgatgcgatgcaaatgggataatgaaatttacactagggcatcctcacta
tataacctcattgatattcacagtaaggctgttgcatccatagttaacaaggctgagcca
ttaggagcacacttgcatacaccagtttggaaggattctcttatgtgttttgatggtaac
aagcaaaatagaagtgcaagcacagtctgctttaattcagggcaatcatctgtccttcaa
aacgaagaattagttcattcagaaactaaacttaaatgtgagagagcatcacattcagaa
gaaggctctggaagcacctcggggaagggtattgcaggattcccctttgatgcttcagat
ttggccaatttcttaacaatggacaggcatattggatttaattgcagtgcacaagttcta
ttaagatcagtgcttccagagaagcaagagttatgtttctctgttgtttctctgttgtgg
cacaagttaattggatcacccgaaactcaacctagtgcagaaagcacttccgctcatcaa
ggatggagacaggttgtggacgcactatgcaatgttgtatcagcatctccaacaaaagca
gctacagcagttgttcttcaggcggagagggaattgcaaccttggattgccaaagatgat
gatttaggtcagaagatgtggagagtcaatcagcgcatcgtcaagttgattgttgagctg
atgaggaatcatgataccccagaatctttggtaattttggctagttcatcagacctactt
ttacgtgccacagatgggatgcttgttgatggagaagcttgcactttaccacagcttgag
ctactggaagcaacagctagagcagttcagccagtgctggagtggggagagtctggactt
gcggttgcagatggcctttcaaacctcttaaagtgtcgtctagcagcaactatccaatgc
ctttctcatccaagcgctcatgtccgtgctctgagcacatctgttcttcgtgatattctt
cgaactggttcaataaaaccctcttctaagcatgcggacaggaatggaatccacggaccc
tcttatcaatatttcagcccagataaaatcgactggcaagctgatattgaaaagtgctta
acctgggaagcacgcagccgacttgccacaggaatgtccattcatcatcttgatactgct
gccaaggagttaggctgtactatttccatttga
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