Populus nigra (Lombardy poplar): 133691167
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Entry
133691167 CDS
T10372
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133691167
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133691167
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133691167
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133691167
NCBI-ProteinID:
XP_061967524
LinkDB
All DBs
Position
4:12931495..12936614
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AA seq
725 aa
AA seq
DB search
MNLKGDKFVRFQDWRSEKSFSSEQGYSIEDGFYARKVKPTFNAVWDNIRRGWEMGCERIR
SLKKPLRFYPRGARSVKEQGPKKKILDPQGSFLQNWNKIFMLVCVLAVAIDPLFFYIPWV
NGTDKDKCLDLDHKMEAAACVLRTFIDVVYILRIAFQFRTGFIAPSSRVFGRGELVEDPK
VIAKKYLTSHFIVDILAILPLPQVVVIIILPSVDGPVSLAAKNLLEIVIFFQYIPRFVRI
YPLFKEITRTSGILTETAWAGAVFNLFLYMLASHIIGAFWYLFSIEREDSCWSEVCKDRA
GCDSTYWYCGNHRQENYTFLTESCPFIQPDQIQNSSVFNFGIFIDALDSGVVESTYFPRK
FFYCFWWGLRNLRFGDICSLGQNLKTSTFIGEILFAIFISIAGLVLFALLIGNMQKYLES
TTVRIEEMRVKRRDSEQWMSHRMLPDNLKERIRRHEQYKWQETRGVEERGLIRNLPKDLR
RDINRHLCLDLIKKVPIFEKMDEHILDAVCDRLKATLYTKDSYIVREGDPVDEMLFIMRG
TLLSVTTNGGRTGFFNAVSLKAGDFCGEGLLTWALDPQSSNLPISTRTVQALSEVEAFAL
EAEDLKTVASQFRRLHHKDIQHTFRLFSVQWRTWAACFIQAAWHRHCRRKQAKSLRQAEE
KLQDALANEASTSPNLDVAIYASQFAANALRNLRQNGTHAARLAQRLSFLPQKPTEPDFS
AQHHK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaaaggagataaatttgtcaggtttcaggattggagatcagagaaatccttc
agttcagagcagggatactccattgaagatggattttatgcaagaaaagtcaaaccaact
ttcaatgcagtttgggataatatccgaagagggtgggagatgggttgcgagaggattaga
agcctaaagaaaccattgagattctatcctaggggtgctcgctcagtgaaagaacaagga
cctaagaagaagattcttgatccacaaggttcatttctccagaattggaacaaaatattt
atgcttgtttgcgtgcttgcagtggctatagaccccttattcttttacatcccatgggtt
aatggcactgacaaagacaaatgccttgatctggaccataagatggaagctgctgcttgt
gttcttcgtacattcattgatgtcgtatacatacttcgcatagcctttcaattccgcact
gggttcatagccccttcttctcgtgtatttgggaggggcgagttggttgaggatcctaaa
gttatcgccaaaaagtaccttacatctcactttatcgttgatattctagcaatccttcca
cttcctcaggtagtggttataatcatccttccatcagttgatggcccggtttcattggct
gcaaagaacttgcttgagattgtaattttcttccaatacataccaagatttgttcgaatc
tatccattgttcaaagaaataactagaacttctggcatacttactgaaacagcatgggcg
ggagctgttttcaacctctttctctacatgctagccagtcatataattggagccttttgg
tacttgttctcaatcgaacgagaagattcatgctggagtgaagtgtgtaaggaccgagca
gggtgtgattctacgtactggtattgtggaaatcatcgtcaagaaaactacacattcctg
actgaatcatgcccttttatccaacctgatcaaattcaaaactcatcggtcttcaacttt
ggtatatttattgatgctcttgattctggagtggtggaatcaacttattttccgcggaaa
ttcttttactgcttttggtggggtttgcgcaatctcaggtttggggatatatgctctctt
ggacaaaaccttaaaacaagcaccttcattggagagattctctttgccatcttcatatcc
atcgctggattggttttgtttgcactgcttattggtaatatgcagaaatatctcgaatcc
acaactgttagaatagaggaaatgagagtgaaaaggagggattcagagcagtggatgtcc
caccgaatgctccctgataacctgaaggaacgaattaggcggcatgaacagtacaaatgg
caagaaaccagaggagtggaagagcgggggctaattcgtaatcttcctaaagatctcagg
agggacataaaccgccatctttgcttggatctgatcaagaaagtgccaatatttgaaaaa
atggatgagcacatattggatgcagtatgcgatcgtctcaaggcaactctttacaccaag
gatagttacattgttcgagaaggggacccagttgacgagatgctatttatcatgcgaggt
actcttttaagtgtgaccacaaatggtggaagaactggttttttcaatgctgtctctctc
aaggctggtgacttctgtggagaagggcttcttacatgggccctagatccccaatcctcc
aacctccctatctcaactagaacagtacaagctctgtcagaggttgaggcctttgctttg
gaagctgaagacttgaagactgtagcttcccagtttcgccgattacatcacaaggatatc
cagcacacattcaggttgttctcagtgcagtggaggacgtgggcagcatgcttcatacag
gcagcttggcatcgtcactgtaggaggaagcaggctaaaagcttacgtcaagcagaagaa
aaactgcaagatgctttggcaaacgaggccagtacttcgccaaaccttgatgttgccatt
tatgcatcacagtttgctgccaacgcattaagaaatctgcggcagaatggcacacacgca
gctagattggcgcagagattgtcatttctgcctcaaaaaccaacagagccggacttttcc
gctcaacatcacaagtaa
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