Populus nigra (Lombardy poplar): 133691308
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Entry
133691308 CDS
T10372
Name
(RefSeq) autophagy-related protein 8i-like
KO
K08341
GABA(A) receptor-associated protein
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
133691308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133691308
04121 Ubiquitin system [BR:
pnz04121
]
133691308
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133691308
Membrane trafficking [BR:
pnz04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
133691308
Ubiquitin system [BR:
pnz04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
133691308
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133691308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
133691308
NCBI-ProteinID:
XP_061967740
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All DBs
Position
4:14943507..14945791
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AA seq
122 aa
AA seq
DB search
MGKSFKDEFTFEQRLEESQDVIAKYPLRVPVLVERYCKTDLPEMEKKKYLVPRDMSVGQF
IHILSSRLRLTPGKALFVFVKDTLPQTAALMDSVYESLKDEDGFLYMCYSSEKTFGHTVP
IS
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagtctttcaaggatgagttcacttttgagcaaaggctggaagaatcacaagat
gttattgccaagtacccccttcgagttcccgttctcgttgaaagatactgcaaaactgac
cttcctgagatggaaaagaagaaatatctggttcctcgagacatgtctgttgggcaattc
attcacattttaagcagtaggcttcgtttgacacctgggaaagccctctttgtgtttgtc
aaggataccttacctcaaacagctgctttaatggactccgtttatgaatccctgaaggac
gaagatggatttctatacatgtgttatagcagtgaaaaaacctttggtcatactgttccg
attagttaa
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