Populus nigra (Lombardy poplar): 133691362
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Entry
133691362 CDS
T10372
Name
(RefSeq) transcription factor SPATULA-like isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133691362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133691362
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
133691362
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
CDK2AP
Dbl7
Ribosomal_S20p
bHLH_LHW
CENPU
Motif
Other DBs
NCBI-GeneID:
133691362
NCBI-ProteinID:
XP_061967816
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Position
4:9442844..9447759
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AA seq
339 aa
AA seq
DB search
MADLYGPARSPATDPEEISTFLQQFLGNNSSSSSSKFIHHALSTPVETGSAAVELLDCHL
FGRSETECGAGAGNSGVNLSDPGGYYVKGGVDNAVSSGISKRREASVEDDLGDFSCDSEK
GAEVAEVQANAVRPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASM
LDEAIEYLKQLQLQVQMLTMRNGLSLHPMCLPGALQPMQPPLSGMSFDEGNGLLTTNTLT
GIFSANEESSVQTALNLPSQCTVSNQPIAIPSGTNITSSETNFGFEPLIHVNHAPFNLCT
SSKEICREGTPQAQIEMNQTVKTSPSGLQSQQGTWALPS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgtacggaccggcacggtcaccggccactgatccagaagagatctctact
ttcctccaacagttcctcggcaacaactcttcttcctcctcttctaaattcatccatcac
gctctctctacgccggtggagactggctccgccgccgtggaattgttggattgccacctg
tttggacggtcggagacggagtgcggagccggtgctggaaactccggtgtcaatctctct
gatcccggtggttattatgttaaaggaggcgtggataatgcggtctcttcaggtatttca
aagagaagggaagcctccgtggaggatgatctaggtgattttagctgcgatagcgagaag
ggggcggaggtggctgaggtgcaagctaatgcagtgcggccgcgaagttcatcgaagagg
agtagagctgcggaggttcataatttatctgaaaagaggaggaggagtaggatcaatgag
aaaatgaaagccttacagaatttaattcctaattctaataagacggataaggcttcgatg
ctggatgaggccattgaatacttgaagcagcttcagcttcaagtgcagatgttaacaatg
agaaatggattgagtttgcacccgatgtgcttaccaggagcactacagccaatgcagccg
cccttgtcaggaatgagctttgatgaaggaaatgggttgttaactacaaacacattaaca
ggcatattttctgcaaatgaagaaagctcggtgcaaactgctcttaatcttccaagccag
tgcacggtctcaaatcaaccaattgctattccttcagggacaaacattacctcatcagaa
actaactttggttttgaaccactgatccatgtcaaccatgcacccttcaatctatgcaca
tcttcaaaggaaatatgcagggaaggaacaccacaggcacaaatagagatgaatcaaact
gtgaagacatctccatccggactgcagagtcagcagggaacctgggcgctcccgtcgtga
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