KEGG   Populus nigra (Lombardy poplar): 133691517
Entry
133691517         CDS       T10372                                 
Name
(RefSeq) ras-related protein RABE1c-like
  KO
K07901  Ras-related protein Rab-8A
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133691517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133691517
   03036 Chromosome and associated proteins [BR:pnz03036]
    133691517
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133691517
   04031 GTP-binding proteins [BR:pnz04031]
    133691517
Membrane trafficking [BR:pnz04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    133691517
 Autophagy
  Other autophagy associated proteins
    133691517
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    133691517
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133691517
  Exosomal proteins of other body fluids (saliva and urine)
   133691517
  Exosomal proteins of colorectal cancer cells
   133691517
GTP-binding proteins [BR:pnz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    133691517
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_29 C2c1_Nuc-II MCM AAA_22
Other DBs
NCBI-GeneID: 133691517
NCBI-ProteinID: XP_061968044
LinkDB
Position
1:25094374..25097113
AA seq 216 aa
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELD
GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN
VSKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQR
LADTDTRAEPTTLKITPTDQAGGGGQGAQKSSCCGS
NT seq 651 nt   +upstreamnt  +downstreamnt
atggctgctcctcccgctagagctcgagccgattatgattatctcattaagcttctcttg
atcggcgatagcggtgtgggcaagagttgccttcttttgcgtttctctgatggttccttc
actactagttttatcaccaccatcggtattgactttaagataagaaccattgagcttgat
ggcaaaaggattaagcttcaaatttgggatacagctggtcaggagcggtttcgaacaatc
acaactgcttactatcgcggagctatgggtattttgctggtgtatgatgtcaccgatgaa
tcatctttcaacaacattaggaattggattcgcaacatcgagcaacatgcttctgataat
gttagcaagatattggtagggaacaaggctgacatggatgaaagcaaacgggctgtgcca
acatccaagggccaagcacttgcagatgaatatgggattaaattctttgaaactagtgca
aagacaaatctaaacgtggagcaagttttcttttcaatagcaagggatataaagcaaagg
cttgcagacactgacacaagggctgagcctactacgttgaagatcactccaacagaccag
gcaggcggaggtggtcaaggtgcccagaaatcttcttgctgtggttcttaa

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