Populus nigra (Lombardy poplar): 133691520
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Entry
133691520 CDS
T10372
Name
(RefSeq) pleiotropic drug resistance protein 3-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133691520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133691520
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
133691520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC2_membrane_3
AAA_29
AAA_18
AAA_22
AAA
AAA_25
RsgA_GTPase
AAA_16
Rad17
AAA_28
AAA_30
SMC_N
NACHT
AAA_33
nSTAND3
RNA_helicase
AAA_23
TsaE
AAA_5
RuvB_N
PduV-EutP
ABC_trans_N
AAA_14
NTPase_1
AAA_7
AAA_17
AAA_19
cobW
Viral_helicase1
NPHP3_N
AAA_15
AAA_11
ORC-CDC6-like
ATPase_2
ABC_ATPase
Spore_III_AA
Mg_chelatase
T2SSE
Motif
Other DBs
NCBI-GeneID:
133691520
NCBI-ProteinID:
XP_061968042
LinkDB
All DBs
Position
4:complement(14892621..14901692)
Genome browser
AA seq
1451 aa
AA seq
DB search
MAAPRNDHKTDSLRMELEESTEKSIMTSFHNHIAPSFISSAATNCDATSLSNLEENEDEI
ELQWAAIERLPTFRRLRLSLFDKKEDGEGEEGKRVVDVTKLEALERHVFVDKLIKKIEED
NCRLLSKYKERMDKVGLELPTVEVRYRNLSVEVEYEVVHGKPLPTLWNTLKTAFGGIANI
TGCKSVRNKIKILKNVNGIIKPSRMTLLLGPPGCGKTTLLQALAAKLDQSLKVEGEISYN
GYKLNEFVPQKTSVYISQYDQHISEMTVRETLDFSARCQGIGGREDIMKEISRREKEAGI
VPEPDIDTYMKATSVEGLKRTLQTDYILKILGLDICADTMVGDAMRRGISGGQKKRLTTG
EMIIGPTKALFMDEISNGLDSSTTFQIVSCMQQLAHITKSTMLVSLLQPAPETFDLFDDI
ILMAEGEIVYHGPRDNVLEFFEHCGFRCPPRKGIADFLQEVVSERDQGQYWYHKQQPHSY
VSIDMLVKNFQEFHVGQKLEGELSRPLQKSESHKNALSFSIYSLRKWELFKVCMDREWLL
MKRNLSLHVFKSAQLVVTALITMTVFIRSRMNIDMVDGNLYMGSLFYALIRLMCNGITEL
SLTIQRIAVFYKQRDFYFYPAWAYSVPAAILKIPFSLLDAFLWTALTYYVIGFSPEPERF
FYHFFLLFLVHQVSVSMFRLIASIVRNPSIASTFALFIILITFLFGGFVIRQPSLPSWLR
WGFWLSPLAYAEIGASLNEFLAPRWQKVSSSNITLGQKILESRGLYFNEYFYWIPLGALI
GFWIIFNIGFTCALSYSKAPRRSRTIISQERLSNILKRKQDLSDFPRAETPKPAAEMEKI
KMILPFEPITISFQNVQYFVDTPKILRKQGLPQKRLQLLHDITGAFRPGILTALMGVSGA
GKTTLMDVLSGRKTGGIIEGEIRIGGYPKAQKTYARISGYCEQTDIHSPQITVEESVMYS
AWLRLPAQIDKGTRSEFVAEVIEMIELGEIRDELVGIPGVSGISTEQRKRLTIAVELVSN
PSVIFMDEPTSGLDARAAAIVMRVAKNIVNTNRTVVCTIHQPSIDVFEAFDELILMKRGG
QIIYSGELGQNSSKLIEYFEGIPGVPKIKENHNPATWMLEVTGSSMEARLGLDFANLYRD
SHVFQKNEELVARLGLPEQGSKELHFSTRFPQNAWEQFKACLWKQELSYWRSPKYNLVRL
IFIIVSSLIFGALLWQKGQKINGEQDFFNILGSIFVFIQFAGIANCSSVMPFVATERTIV
YRERFAGMYSSWAYSSAQVIVEIPYILLQAVLFLMITYPAINFYWSAYKAFWYFYSMFCT
LLYFNYLGLLLVSLTPNFQMAAIWASFFYTLTNLFSGYLVPEPKMPRWWAWGYWICPISW
SLKGLLASQYGDIETEITAYGERKSISSFLQSYFGYKQDDLGVVAIVLLAFPVFFALAFA
ITIAKLNFQKR
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcctcgtaacgatcataaaacagattccctgaggatggagttggaagagtcg
acagagaaaagcatcatgacatcatttcataaccatattgcaccaagcttcattagtagt
gctgcaactaattgtgatgcaacatccttatccaacttggaagaaaacgaagatgaaatt
gagctacagtgggcagccattgaaagactacccacttttagacggcttaggctgtcattg
tttgacaaaaaggaagatggcgaaggagaggaaggcaagagggtggttgatgttaccaag
cttgaagctcttgaacgccatgttttcgtcgacaaactaataaagaagatcgaggaagat
aattgcaggctgttaagcaagtataaagaaagaatggacaaggtgggtctggaattgcca
actgtggaagtgagatatcggaatttgtctgtggaggtggaatatgaagtggttcatgga
aagccccttcctactctttggaacaccctcaagactgcatttgggggtattgcaaatatt
acgggatgcaagtcggtacgaaacaagattaaaattctcaaaaatgtcaacggcatcatc
aagccctcaaggatgactctcttgcttggtcctccaggttgtgggaagaccactttacta
caggcacttgcagcaaagcttgaccagtccttgaaggtcgagggggaaatttcatataat
ggttacaaactcaatgagtttgttcctcagaagacatcagtttacataagccaatatgac
cagcacatttctgaaatgactgtgagggaaaccctcgacttttctgctcgttgtcaaggc
attgggggcagagaagatatcatgaaagaaatcagtagaagggagaaggaagctggtatt
gtcccagaaccggatatagatacctacatgaaggcaacttcagttgaaggattgaaaagg
actctccagacggactatatcttgaagatccttggactggacatatgtgctgatacaatg
gtgggagatgcaatgaggagaggaatttcaggtggtcaaaagaaaaggctaacaacaggg
gaaatgataattggtccaacaaaagcgctctttatggacgaaatatccaatggcttagac
agctcaaccaccttccagattgttagctgcatgcaacaattggcacacataacaaaatca
accatgttggtttcacttcttcagccagctcccgagacctttgatctcttcgacgacatt
attttgatggcagagggagagatagtataccatgggcctcgagacaacgttctggagttc
tttgaacattgtggttttaggtgcccaccacgaaagggcattgctgacttcctccaagaa
gtagtttctgaaagggatcaaggacagtactggtatcataaacagcaacctcatagttat
gtttctatcgatatgcttgtaaagaatttccaggaatttcatgtgggacagaagctagaa
ggggagctctccaggcccttacagaaatctgaaagtcataaaaatgctctgtcattcagc
atctactccttaagaaaatgggaactattcaaagtttgtatggatagagaatggctgctt
atgaagcgaaacttgtctcttcatgtattcaaatcagcacagctcgtggtcactgcatta
attacaatgacagtgttcatacgtagtcgaatgaatattgacatggtcgacggcaaccta
tacatgggttccttgttttacgctctaattagattaatgtgcaatgggattaccgaattg
tcattgactatacaaagaatagcagttttctacaagcaaagggatttctacttttatcct
gcgtgggcttattctgttccagctgccattttaaagattccgttttcattgctagatgca
tttctttggacagctcttacctattacgttattggtttcagtcctgaaccagaaaggttt
ttctaccacttctttcttctgttccttgttcatcaagtgtctgtatcaatgttccgtctg
attgcttccatagttcggaatccatctattgcatcaacattcgctcttttcattatatta
atcacatttctatttggtggatttgtaattcgacaaccttcgttaccttcttggttgagg
tggggcttttggctctctccactggcatatgcggaaatcggtgcatctttaaacgaattc
cttgctccgaggtggcaaaaggtttcatcttccaatattacattaggtcagaaaattctc
gaaagccggggactatacttcaatgaatacttctattggatacctttaggagcattaatt
ggattctggataattttcaacattggattcacctgcgccctcagttattcaaaagcccct
cggagatctcggaccataatttctcaagaaaggctctccaatattctaaagagaaaacaa
gatttgagcgactttcctcgcgctgaaacaccaaaaccagccgcagaaatggagaaaatc
aaaatgattttgcctttcgagcccataacaatatcctttcagaatgtgcaatattttgtc
gacactcctaagatattaagaaagcaaggtcttccacaaaaaaggctgcagcttcttcat
gatatcactggtgctttcagacctgggattcttacggcattgatgggtgttagtggagct
gggaaaacaacactaatggatgttctttctggaagaaaaactggtggcattattgaaggc
gagataagaattggagggtaccctaaagcccaaaagacgtatgctagaatatctggttat
tgtgaacaaacagatattcattctccacagattacagtagaagagtcagtaatgtactca
gcttggttgcggttgccagctcagattgacaaagggacaagatctgaatttgtagcagaa
gttattgagatgattgagcttggtgaaatcagagatgaattagttggcatccctggtgtt
agtggtatatcgaccgagcagcgaaaacggctaactattgccgtagaacttgtttccaat
ccatctgtaatattcatggatgagcccacctctggtctggatgccagagcagctgcaatc
gtcatgcgagttgcaaagaacattgttaatacaaacaggacagttgtgtgcacaattcac
cagccaagtattgatgtttttgaggcatttgatgagctcattttgatgaaacgaggagga
caaataatatattctggagagctgggtcagaattcaagtaagcttattgagtattttgag
ggcattcctggagttcccaaaatcaaagaaaatcacaaccctgcaacatggatgttagag
gttaccggttcttctatggaagctcgacttggtttagattttgcaaatctctacagggac
tcccatgtcttccagaaaaatgaagagctagttgctagactgggccttccagaacagggt
tcgaaggaattgcatttctccacccgatttccacaaaatgcatgggaacaatttaaggcg
tgtctttggaaacaagaattgtcctactggagaagtccaaaatataacttggttcggttg
atatttatcatcgtgtcttctttgatattcggagcacttctttggcaaaaaggacagaaa
ataaatggtgaacaggacttcttcaacatactgggatctattttcgtctttattcagttc
gccggaatagccaactgctcatctgttatgccatttgtagctactgaacgcaccattgta
taccgggaaaggtttgctggaatgtactcttcgtgggcgtactcgtctgcacaggtgatt
gtagaaattccatatatattgctccaagctgtgctgtttctgatgattacatatccagca
ataaatttctactggtcagcttacaaagcattttggtacttctactcaatgttctgcaca
ttgctctatttcaattacctgggattgctgcttgtctcattgaccccaaatttccaaatg
gctgcaatatgggctagtttcttctatacccttacgaatttgttctcaggctaccttgta
ccggaaccgaaaatgcctagatggtgggcttggggctattggatttgtccaatttcatgg
tccttgaaaggccttctggcatcacagtacggtgatatagaaacagaaatcacggcatat
ggagagcgaaaatcaatcagttccttcttacaaagttattttgggtataaacaagatgat
ttaggtgtagtggcaattgttcttcttgcttttccagttttctttgcactcgctttcgca
attaccatagcaaaactgaacttccaaaaaaggtaa
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integrated database retrieval system
